Gene Aasi_0581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0581 
Symbol 
ID6376411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp747072 
End bp747914 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content32% 
IMG OID642681736 
Producthypothetical protein 
Protein accessionYP_001957711 
Protein GI189501994 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CTCTATGCTT CTTCAAACCT CAAGAAATAG CCTATTTACG TATATGTTCA 
GCCGCAATTG TCTTACTACC CTATTCTTTA CCTCAACTTA AAAAACTTAC ATTTAGGCAC
TATAAGCTAC TGGCCTTAGT AGGGGTAGTG GGAACATTAT TGCCGCTTTT TTGCTTTGCA
ACAGCTCAAC TTCATATTAA TAGTGGGGTA CACGGCGTAC TTAATTCATT AACTCCTGTA
TTCGTATTAA TGGTAGGGAT AATATTCTTT AAGAAGAGAC TCTTTAAGAA TGAAATACTG
GGTGTTTCTT TAGGCATATT AGGGACGGTA TTATTAGTGA TTATTGAATC CCGTTTCTTC
GCAGGTAGTT TCAATTATTA TATACTATTA TCTCTTTTAG GAAGTTGTTT ATATGGAAAT
ACCACTAACC TTATAAAATA TTATCTAAAT GATATCAAAA GCACTACGAT AGTAAGTGTT
TCTCTATTAC TAATAGCGAT TATTAGTGGT ATATACTTAG CCACTCATCC CAATATTTTT
ATTAAAATGG ATACATCTAT TGAGTCTTAT CAAGCGTTAG CGTATGTTCT TTTTGCAGGT
ATTGTTAATT TAGGTATAGC TAATATTATT TTAACAGAAC TAGTAAAAAT AACTTCACCT
GTTTTTACCA GTACAGAGGC ATTATTAGCT CCTATTGTTT CACTTAGCTG GGGATTAGTG
GATGGAGAGC AATTACTTTG GGAACATTAT GTAGGAGCAA CCATTATATT ATTAGGTGTT
TATTTTATTA ACAAGCCTAA AAAAGAAATA CCAAAACAGC CAGTATTTAA CGCAGAAGTA
TAA
 
Protein sequence
MKKALCFFKP QEIAYLRICS AAIVLLPYSL PQLKKLTFRH YKLLALVGVV GTLLPLFCFA 
TAQLHINSGV HGVLNSLTPV FVLMVGIIFF KKRLFKNEIL GVSLGILGTV LLVIIESRFF
AGSFNYYILL SLLGSCLYGN TTNLIKYYLN DIKSTTIVSV SLLLIAIISG IYLATHPNIF
IKMDTSIESY QALAYVLFAG IVNLGIANII LTELVKITSP VFTSTEALLA PIVSLSWGLV
DGEQLLWEHY VGATIILLGV YFINKPKKEI PKQPVFNAEV