Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0469 |
Symbol | |
ID | 6377378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | + |
Start bp | 571894 |
End bp | 573210 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642681629 |
Product | hypothetical protein |
Protein accession | YP_001957608 |
Protein GI | 189501891 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATAT TAATTATGAT CATCCAATTT GTTCTAGGTC TATCTATTAT AGTAGGTATA CATGAGCTGG GACATATGCT TTTTGCAAAA CTATTTGGTA TGCGTGTAGA ATCATATACC ATTGGATTTC CACCCAAAAT TTTTCGCTTT AAATGGGGGG AAACAGAATA TGGGATAGGA GCATTGCCTT TAGGAGGGTC TGTAAAAATT GCTGGCATGA TAGATGAATC CTTAGATACT AACCATCTTA GCCAAGCTCC ACAACCATGG GAGTTTAGAT CTAAACCAGC TTGGCAAAGG CTATTAGTTA TGCTAGGTGG TATTATCTTC AATACTGTTA GTGGCTTACT TATTTATATT TGTATCACGT TGGCGTTAGG AGACACGTAT CTTTCCAAAG AAGAAGTCAA CAAGCATGGT ATTCTTCCTA ATTCTACTGG AATGATGCTA GGTTTCCAAG AAGGTGATAA AATTGTCAAT ATTAATGGGA AAGATTTTAC CAACTTTGCT GAAGTAATTT CACCTCGTAC TTTACTAAAA ACGAACGGCT ATTATACCGT TGAAAGAAAT GGACAAGAAG TACGAATTAA TATTCCTAGC AACCTATTAG AAAAGTTGTC AGAAGAAAAA GCGTCTGTAG AATTTATAGT TCCTAGAGCA CCTTTTGAAG TAAAAGGAAT TCAGCCACAT GGTGGAGCAC AAAAGGCTGG TTTACGTCCA GGAGATCAAA TTGTGGCAAT AAATGGACAG CCCACACCTT ATTTTAACCA GCTACAGGCA GCTTTGCTAG CAAATGCTGG TCATCAAGTA GACATTACTT ATTTAAGAGA TGGTAAGCTT CAAAAAACTG TTGCACCCAT AAATGCTGCT GGTAAGTTAG GTTTCTGCTC CAGGCCTCTA CTAAGATACG AGAAAAGAAA GTATAACCTG GGCCAGGCTA TTGTTATAGG TAGTACAAGA GCTATAGAAG TAGTGAGAAC TAATATAATT GCTTTAGGTA AGATCATAAC TGGTAAGGTT TCTGCTTCTA AATCATTAAG TGGCCCTATT GGAATTGCAC AAATATTTGG AACGCATTTT GACTGGGTAC ACTTCTGGAG CATTGTAGGG TTCTTATCAA TCATACTTGC TTTTACCAAT CTACTTCCCA TCCCAGCCTT GGATGGTGGG CATGCTATAT TCTTAAGCTA TGAGCTTATA ACAGGACGAA AGGTTCCTGA CAAAGTATTA GAGAATGTAC AAAAGGTTGG CTTAGTCATT CTACTTCTAC TTATTGGTTA TGGATTCTTT AATGATTTAC GTAAGTTATT TTGGTAA
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Protein sequence | MQILIMIIQF VLGLSIIVGI HELGHMLFAK LFGMRVESYT IGFPPKIFRF KWGETEYGIG ALPLGGSVKI AGMIDESLDT NHLSQAPQPW EFRSKPAWQR LLVMLGGIIF NTVSGLLIYI CITLALGDTY LSKEEVNKHG ILPNSTGMML GFQEGDKIVN INGKDFTNFA EVISPRTLLK TNGYYTVERN GQEVRINIPS NLLEKLSEEK ASVEFIVPRA PFEVKGIQPH GGAQKAGLRP GDQIVAINGQ PTPYFNQLQA ALLANAGHQV DITYLRDGKL QKTVAPINAA GKLGFCSRPL LRYEKRKYNL GQAIVIGSTR AIEVVRTNII ALGKIITGKV SASKSLSGPI GIAQIFGTHF DWVHFWSIVG FLSIILAFTN LLPIPALDGG HAIFLSYELI TGRKVPDKVL ENVQKVGLVI LLLLIGYGFF NDLRKLFW
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