Gene Aasi_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0450 
Symbol 
ID6377235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp531042 
End bp533162 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content36% 
IMG OID642681611 
Producthypothetical protein 
Protein accessionYP_001957590 
Protein GI189501873 
COG category[R] General function prediction only 
COG ID[COG0658] Predicted membrane metal-binding protein 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.778093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTT GGTCTGCTTT TCCTTTTGTA CGCATTACCA TTTTTTTTAT TGGTGGTATT 
CTATGGGCCT ACTACTATGG TCCCTTATCA TATAAATTAG TAATGCTGGG AACAATTGTA
CTGGCTACTA GTTATCTAAT CCTAATTATT ATCTGGCAAC GTGCCAGGTT CTATTTTTTA
AATTCTTGGC TAGGAATAAT AGGATTGTCT AACATCTTTT TTGCAGGCTG CTTATGCCTT
TTAAATTATC AGGGTAATGC TAATTCAGTA AAGTTACAGC ATCAGGTAGA TGACATAAAA
GCATATGTTG CAGTGGCGTT GGAAGATGCT ATTATAAAAG AGGACCGCTT GTCTGTTACA
GTAGCTATTC AGCAAGCTCA CATACAAGGT AAATGGGAAA ACTTAACAGG TAAAGTGCAT
TTATTGGTAG ATAAGCCTTC CGCAGCTACA ATTCAGTACG GAGAGGTGTA TATGATTGTA
GGTAAACCTC ATCTGATTGC TGTCCCGCGT AATCCTGAAG AATTTAACTA TAAACGCTTT
TTGAGCCATA AACATATTTA CTACCAACAT CAAGTATATC TAAATTATAT ACGCAAGATA
ACATATGCAC CTCCTAGCTC CTTGCAAGCT ATTTGCCTAA GAATTCGTAA GTTTTGCAAG
GAAGTACTGA CTCAGCATAT AGAGGGTTTG AATGAAAGGG GTATAGCTCT TGCTTTAGTA
TTGGGTATAA AAGATGAGCT GAATGCAAAA GTGCGAGATG CTTATGCTAG CGCAGGAACC
ATGCATATAT TAGCAGTTTC TGGTTTGCAT GTAGGTATAT TATATTGGTT GCTGAGTGTT
CTATTATACA GGCGTAAGAA ATCTCAAACA AGGAGCAAGT GGCTTGGTTC TATACTGATA
TGTGGAGCGC TTTGGATATA TGCTGGTATG ACGGGTTTAA CACCTTCTGT AGTACGTGCT
ACCCTGATGT TCAGTCTCGT AATTGTGGCA AGGCTATTGG GTAGGGCAGG CAATATTTAT
AATCTATTAT CAGTATCTGC TTTTATATTA TTGTTAATTA ATCCACTGTT GATTTTTTCA
GTTAGCTTTC AGCTATCTTA TTTGGCGGTA TTAGGCATCA TATATTTGCA ACCTAAAATT
TATGGTTGGT TCAACTTTAA GAATATAGTG TTTCGTCAAC TTTGGCTATG GACCTCTGTG
TCTTTAGCTG CACAATTGGC CACTACGCCG ATTAGCTTAT ATTATTTTCA TCAATTTCCA
ACTTATTTCA TTTTTTCAAA TTGGGTAGTA GTACCAGCAG CCTTCTTTAT TTTTATTTTA
GGATTGTGTG TATTATTTAC TTGTTGGTGG GTTAAGTTAA GCGTTTACAT AGCTTGGATA
CTTGAATATT TGGCTGGCTT AGTTAATCAA TTTGTAGCAT GGATTAGTAG CCTTCCTTAC
AGTGTAGTGT TTGATATCTA TATTCATACG CAAGACTTAT TGCTATGGTA TGGATTAATA
ATAAGTGTGC TGGTATTTCT GGCTAAAAGA AAATTCTGGT TACTTTGGCC TATTAGTTCA
ATTGCTGTGC TGCTTAGCAT ACGTACTACA CTAGCTATTA TACAACATGC ACACCAACAG
GGTATAGTTT TTTATAGTAT TCCTGGTCAT CAAGCAGTTG GTTTGTTGAA AGGTAGAGAG
AATCTACTAT TGGTTGATGA AGAATTATAT AAGCAGGATA AAAAGTTTGT CTATCATGTT
AAGTCTAGCC AGGTAGCCAT AGGTATACAT AAGAATTATA GTTATACTTT TAAGCAAGCA
AGTGATAAGG CTACTATACC TTTATCGGAT TGGCATGGAA TTACAATAGG TGTATGGAAT
CAGAAGAAAT TTATTTTTCT TAATAAGTCA GGCTCATATT TCCCTGACTT GCAGCAAAAA
ATTTACACAG ATTTTTTAGT AATAGAAGGG AATAGCATAC AATCTTTAAA GCTGCTATTG
GAACAGTTTG AGTTTAAATG TTTAATCATA GGGGCTTCTA CTACCAAACA GCTAGACCGA
TGGCTTAAAG AAGAAGCCGA CAGATTACAG CTTAATAATC ACTCTTTACG TCAACAAGGA
GCTTTAAAAG TCTTTTGGTG A
 
Protein sequence
MSFWSAFPFV RITIFFIGGI LWAYYYGPLS YKLVMLGTIV LATSYLILII IWQRARFYFL 
NSWLGIIGLS NIFFAGCLCL LNYQGNANSV KLQHQVDDIK AYVAVALEDA IIKEDRLSVT
VAIQQAHIQG KWENLTGKVH LLVDKPSAAT IQYGEVYMIV GKPHLIAVPR NPEEFNYKRF
LSHKHIYYQH QVYLNYIRKI TYAPPSSLQA ICLRIRKFCK EVLTQHIEGL NERGIALALV
LGIKDELNAK VRDAYASAGT MHILAVSGLH VGILYWLLSV LLYRRKKSQT RSKWLGSILI
CGALWIYAGM TGLTPSVVRA TLMFSLVIVA RLLGRAGNIY NLLSVSAFIL LLINPLLIFS
VSFQLSYLAV LGIIYLQPKI YGWFNFKNIV FRQLWLWTSV SLAAQLATTP ISLYYFHQFP
TYFIFSNWVV VPAAFFIFIL GLCVLFTCWW VKLSVYIAWI LEYLAGLVNQ FVAWISSLPY
SVVFDIYIHT QDLLLWYGLI ISVLVFLAKR KFWLLWPISS IAVLLSIRTT LAIIQHAHQQ
GIVFYSIPGH QAVGLLKGRE NLLLVDEELY KQDKKFVYHV KSSQVAIGIH KNYSYTFKQA
SDKATIPLSD WHGITIGVWN QKKFIFLNKS GSYFPDLQQK IYTDFLVIEG NSIQSLKLLL
EQFEFKCLII GASTTKQLDR WLKEEADRLQ LNNHSLRQQG ALKVFW