| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0430 |
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| Symbol | |
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| ID | 6376786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | + |
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| Start bp | 498341 |
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| End bp | 499099 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642681594 |
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| Product | hypothetical protein |
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| Protein accession | YP_001957575 |
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| Protein GI | 189501858 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.877766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAA TTCTTTCTTA TCCCTCAAAG GTAGCTTCTG ATCAAATTAA CTATGTTCGA
TTAAATAAAT GGATAAGTAA TGCCGGGATT TGTTCTAGAA GAGAAGCGGA TGAACTCATA
CAAGCTGGCC GTATCACTGT TAATGGTGAA AAAATAACAA CTTTAGGTTA TCAAGTAAAA
AATACTGATA TAGTAAAATT TCGTGATAAA GTATTAAAAC CAAACAAACA CGTTTATATT
CTTCTTAATA AGCCTAGAAA CTGTATTACA ACGGCATTTG ATCCAGAACG TAGGAGAACG
GTTTTAGATT TTGTAAAAGG TGCTTGCCAA GAGCGGGTAT ATCCTGTGGG TAGGCTTGAT
CGTAATACAA CGGGACTTTT AGTTTTAACC AATGATGGGG ACTTGGCCCA AAAGTTGGCT
CACCCTTCTT ATCAAATAAA AAAAATCTAT CAAGTGGAGT TAGCAAGTCC CATCCAACCA
AAAGACTTAG CAGCCATTAA AGCGGGTATT TGTCTAAAAG ATGGTATTGT ACAGGTTGAC
AGTATCTCTA TAGTACAAGG AGATGAAAGT AAGTTGGGAA TAGAAATACA TTCAGGAAAA
AATAGAATTA TCAGGCGCTT ATTTGAGCAT CTCGGCTACC AAATTATTAA TTTAGATAGA
GTAATGTATG CTAATCTTAC TAAGAAAGAA CTTCCTAGAA GTAAATGGAG ATTTTTAACT
AATCAAGAGG TAGGCTATTT GAAAAGCTTA AAAAGCTAG
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| Protein sequence | MSKILSYPSK VASDQINYVR LNKWISNAGI CSRREADELI QAGRITVNGE KITTLGYQVK
NTDIVKFRDK VLKPNKHVYI LLNKPRNCIT TAFDPERRRT VLDFVKGACQ ERVYPVGRLD
RNTTGLLVLT NDGDLAQKLA HPSYQIKKIY QVELASPIQP KDLAAIKAGI CLKDGIVQVD
SISIVQGDES KLGIEIHSGK NRIIRRLFEH LGYQIINLDR VMYANLTKKE LPRSKWRFLT
NQEVGYLKSL KS
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