Gene Aasi_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0428 
Symbol 
ID6376784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp496970 
End bp497734 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content33% 
IMG OID642681592 
Producthypothetical protein 
Protein accessionYP_001957573 
Protein GI189501856 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.891303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA ATACTGTAAA AAACCTTAGC CTTTTGCTTG AGTTACAAGA AATTGATAAA 
CAAATTAATA AAATTATTCA AGTAAGAGGT GGGTTGCCCC AGGAAGTGAA AAAGTTAGAA
GATGATTTGT CTAACCTACA GTTGCAAGCC ACAACCTGCC AAGAACAGAC TATTAATCTA
GAGCAAAATA TCGCCTCGCT ACGCATAAAG ATTAAAGATA TAGAAGCACA AGTGAAGCGA
TATGAGGACC AGCAGATGAA TGTAAGGAAT AATAGAGAAT ATGATGCTAT AACTAAGGAG
ATAGAGTTAC ATAAATTAGA TATTCAATTA GCAGAGAAAA AGATTAAAGA GAGTTATGAA
CAAATAGAAA AAAGTAAGCA TGCTATTGAA TTTCTTAATA AATCTATTGA AAAAGCCAAA
CAGAACCTGG CATCTAAGCA AGAAGATTTA AATTCAATAG TAGGAGAAAG CAAAGGAGAA
GAAGAAAAAT TAAATAAAAA GTGTCAACAA TTACAAGCTA ATATTGATAA GGCCTTACTT
CAAAGCTATG AGAAGATTAG AAATAATGTG CGCAATAACT TAGCTGTAGT AACAGTAGCT
GGGGGGGCAT GTGGGGGATG TTTTACGATT ATATATCCAC AAATGCAAGC AGAAATCAAA
GAAAAAAGGC AAATAATAAA ATGTGAGCAC TGTGGTAGAA TTTTGGCAGA TGTAGTAGAT
TCTGTAAGTG TAATTGCTGC AGAAGCAGAT AGCCAAGTAG ACTAA
 
Protein sequence
MENNTVKNLS LLLELQEIDK QINKIIQVRG GLPQEVKKLE DDLSNLQLQA TTCQEQTINL 
EQNIASLRIK IKDIEAQVKR YEDQQMNVRN NREYDAITKE IELHKLDIQL AEKKIKESYE
QIEKSKHAIE FLNKSIEKAK QNLASKQEDL NSIVGESKGE EEKLNKKCQQ LQANIDKALL
QSYEKIRNNV RNNLAVVTVA GGACGGCFTI IYPQMQAEIK EKRQIIKCEH CGRILADVVD
SVSVIAAEAD SQVD