| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0422 |
|---|
| Symbol | |
|---|
| ID | 6377322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 489117 |
|---|
| End bp | 490253 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642681586 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957567 |
|---|
| Protein GI | 189501850 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0781] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATAGATA AACCCATTAT TAATCGCCGC TTTGTTCGCA TTAAAGCTCT ACAAAATCTT
TATGCGTTTT ATATTAACCA ACAAGCAAAT TACCAAAACG CTTTAGAGCA AATCAAGCTT
GAATTTATTC CTGATGTCTT TGCAAGCACT CCAGTAAGTG AAGAACAGTT AGCCCAAGAG
AAATCTCAAG CCACATTAAT ATTTAATTCT TGGGTATCTG AGGACAAAAT ACACTTGCCT
ATACAACATA ATTACAGTGC CGTAATACAA GAAACTGCAA AAAAAGTATG GGCTAGCTAT
AAATTTAACC TTACACAAGA TTCAAAAATA TTAGGAAACG GCTGGGGAGC AGCAATAGAT
AGCATTCGGA ACACTTATCT ACTGATTTTA CAATTGCTTG TTGAATGGTT CCAGATAGCA
CAGCAACAAT CACAAAAAGC CAGCCAGCTG CGACAAGCTG GTATTACATA TCCTATAGTG
CTAGCGCAGA GCGAGCTATT AGGGCATTTG CAAACAAATA ATACTTTTTT AGATCTTACA
CAGCAATATA AAGCTAGCTG GGAACCTCAT ATGGATGTAA TAGTGAGGTG GTATAACCAA
TTTATTAAAG AAGCTCCCAT ATTAACTAGT GATACATCCA TTACAGACAA TGCAGGACAA
GGACAAGCAC TTATAAAGTA CCTTGTAGAA GATATTATTT TTACACAGGA AGACATTCAG
AATTTCTTTA ATGATATAGA CTTAAGTTGG ATAGAACATA AGTCTGTTGT TAAAAAGCTG
TTGCATGAAT TATTATCAAA ATCAGATATC GAGTTACTGG TAAAAGAGAT AGAAGATGCC
ATGCAGATAG GAACCAATGC TGCTTCTTTT TATGATAAGC TAATAGCTAC TGCTTTAGAG
CAAGAAAAAT TTATAGATAA TCTGATACAG CAACATATAA AAAACTGGTC TATAGAAAGA
ACAGTACTTT TAGATAGAAT TATCATCAAA ATGGGATTAT GCGAAATGAA ATATTTTGAT
AGTATACCTA CTAAAGTAGC TATTAATGAA TATGTAGATT TAGCAAAAAA ATATAGCACC
GCTAAAAGCA GCAAATTTAT TAATGGTGTC TTAGATACTA TTGCAAAAAC CATTTAA
|
|---|
| Protein sequence | MIDKPIINRR FVRIKALQNL YAFYINQQAN YQNALEQIKL EFIPDVFAST PVSEEQLAQE
KSQATLIFNS WVSEDKIHLP IQHNYSAVIQ ETAKKVWASY KFNLTQDSKI LGNGWGAAID
SIRNTYLLIL QLLVEWFQIA QQQSQKASQL RQAGITYPIV LAQSELLGHL QTNNTFLDLT
QQYKASWEPH MDVIVRWYNQ FIKEAPILTS DTSITDNAGQ GQALIKYLVE DIIFTQEDIQ
NFFNDIDLSW IEHKSVVKKL LHELLSKSDI ELLVKEIEDA MQIGTNAASF YDKLIATALE
QEKFIDNLIQ QHIKNWSIER TVLLDRIIIK MGLCEMKYFD SIPTKVAINE YVDLAKKYST
AKSSKFINGV LDTIAKTI
|
|---|
| |