| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0322 |
|---|
| Symbol | |
|---|
| ID | 6377477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | + |
|---|
| Start bp | 371610 |
|---|
| End bp | 372554 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642681501 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957485 |
|---|
| Protein GI | 189501768 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAACC AGCTAACAGA AGATACAGAA AAGCTACTAC CTCAGGAAGC AGTAGGGATA
AGTGAACCAC TAGGAGAAAT AGCCTTTAGT TTAGATGATG CCCCCATGCC TAGCACAGCT
ATTTTTAATG GTGTTGAAAA AACAGAAAGG ATCATACAAG CATTGCAAGA TGCTAATTGC
CCTGCGGTAG GTATTTTTGC TATAGGCAAA TATGCGCATA CACCCACTGG ATTAAAGCGA
TTGCACATGT ATGCAGAGGC AGGCCATATT ATAGCTAACC ACTCTTATAG TCATTATAAA
CTTAATGATA TTACTGCCCA AGACTTCATA GAAGATATCA AGAAGGCTCA CGAGATTTTA
AGCCCATTGC CCAGCTTTAA ATTACTATTT AGGTTTCCTT ATTTAGCTGA GGGTAAAGAT
GAAGTTCAAC GCCAAGAAGT TATACAATAT TTGCAATCTA TGGGTTATCG AGAAGGCTAT
ATTACCGTTA ATAATCACGA CTACTATATG AGTAAGTTGC TGGTTGATGC AGTTAAAGCA
GGCAAAATAA TTGATCACGA GAAGCTTAAA AACTTATACG TTAGTATCCT ATGGGATTGT
ATCATAAGTG TTGATAAGCT ATCGCACAAA GTATTAAATA GAAAGGTAAA GCATGTACTT
TTACTACACG AAAATGATTT AGCAGCGCTT TTTATAGGGG ACCTTATAGA ACATATCCGT
AAACAAGGGT GGAAAATTAT TTCTATTGAG GAAGCTTATG AAGATCCACT AGCCCTAATG
CCTGTTACTA ATACATATAG TTTGGTGGGA CGCTTGGGAG CTATAGCGAT ACAAAAGGGC
CTGGATAAAA AGCTGGCAGT ATTTCCAGAA ACGGCCGAAT ATAGTTATAT ACCTAGAGCT
TTAAAACAAC AGCAAATATT CAAAAGTCCC GTATTTAACC CTTAG
|
|---|
| Protein sequence | MANQLTEDTE KLLPQEAVGI SEPLGEIAFS LDDAPMPSTA IFNGVEKTER IIQALQDANC
PAVGIFAIGK YAHTPTGLKR LHMYAEAGHI IANHSYSHYK LNDITAQDFI EDIKKAHEIL
SPLPSFKLLF RFPYLAEGKD EVQRQEVIQY LQSMGYREGY ITVNNHDYYM SKLLVDAVKA
GKIIDHEKLK NLYVSILWDC IISVDKLSHK VLNRKVKHVL LLHENDLAAL FIGDLIEHIR
KQGWKIISIE EAYEDPLALM PVTNTYSLVG RLGAIAIQKG LDKKLAVFPE TAEYSYIPRA
LKQQQIFKSP VFNP
|
|---|
| |