Gene Aasi_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0319 
Symbol 
ID6377730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp368140 
End bp369486 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content36% 
IMG OID642681497 
Producthypothetical protein 
Protein accessionYP_001957482 
Protein GI189501765 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA TACTACATTA CCTTATAGCT TTTTTCATGA TATTTATGTT AGGATGTCGT 
ACTCCTAATC CTATACCCAC AAATCTACCA GACTTAGTAG AGGAGGAAGT AGCGTTAGCA
TTTGAGAAGC ACTCCTTTGT ATCCTTCCAA GAGTTGCATG CTGATACACC TTATAGTATA
TGGGAACAAT TTTTTACCCA GCGAGGTGGT CGTTCCTTTT GGCAAACTCT ACAACAAAGG
GAAGATAGCT TAAATTTTGA TTTTGCAAGT CTTATTGTTC CTTCACTCCT TATTAATCCA
TCAGGATGGA TAACTGAACA AGAAAAAAAT GAAGTGGCAG CAGGAATTAT ACACTACTTA
GTTTGTTATC AAGTTTCTGT AAAAAATATG ACACTGAATC CGAAAATTAC GCGTATTGAA
GTTGACAGAA GCAACCAACT TAGTTTTATA CCAGCTGAGA TAGTTAATAT TGTTAGCTTA
ACCTCTCTGG ATCTCTCCCA TAATTGTATT AGAGAACTAC CTGATGGAAT GTGTAATTTA
ACAGGACTTA ACCTATCTTG GAATCAGCTT AGAGGCCTAC CAACTAGAAT AGACAATCTT
GACAAATTAA CCTTTCTAGA CTTATCGCAT AACCGTATTA CAGAGCTGCC AGCTGAAATA
GGAAACCTTG CTAGCCTAAA GATGCTGAAC CTAGGATATA ACCAGCTTGT AGAACTACCC
GCTGATATAA GTAATTTTAC TAACTTAACC TCTCTGGATC TCTCCCACAA TCGTATTATA
AAGCTATCTG ATGAAATATT CAATTTTATT AGCCTAACTT GTCTGGATAT CTCTCATAAT
GGTATTAGAG AGCTATCTAA TGAAATATTC TATCTTACTA GCCTAAGGGT GCTGAATTTA
GAATATAACC AGCTTGTAGG ACTACCAGCT GAAATATTTA GTTCTACTAA CCTAAGCTAT
CTGAATCTAT GCGAAAATAA ACTTAGAACA CTACCTGCTT CTATAAATAG CAAATTTACT
AAACTACTAG AGGATCAAGT ACAAGATGAA TTAGAACAAC GTATAGAAGA GGAGTCTGCG
GAAGACCTAT TAGAAGAATA TGAGGAGGTG CTAGAAGATG AAGTCCGAGA GGATATTGCT
AATGGCAAAC TAGGCAACAA CTCATGGTTA GCTTCTAGCG AGTTACTACC AATTAATAAG
GGAATCCTAA AGCATGCGTT AAGAAGACAT GCTCGTCAAA CATTTCCTCA TAGTTTAACT
ACCCTGTGTA TGAATTATAT AGAAAACACT CCAAAATCGA GAAAAGTATT TACCAGAAGA
AGTCTGTCAA GCGGCGCGAG AAAATAG
 
Protein sequence
MKIILHYLIA FFMIFMLGCR TPNPIPTNLP DLVEEEVALA FEKHSFVSFQ ELHADTPYSI 
WEQFFTQRGG RSFWQTLQQR EDSLNFDFAS LIVPSLLINP SGWITEQEKN EVAAGIIHYL
VCYQVSVKNM TLNPKITRIE VDRSNQLSFI PAEIVNIVSL TSLDLSHNCI RELPDGMCNL
TGLNLSWNQL RGLPTRIDNL DKLTFLDLSH NRITELPAEI GNLASLKMLN LGYNQLVELP
ADISNFTNLT SLDLSHNRII KLSDEIFNFI SLTCLDISHN GIRELSNEIF YLTSLRVLNL
EYNQLVGLPA EIFSSTNLSY LNLCENKLRT LPASINSKFT KLLEDQVQDE LEQRIEEESA
EDLLEEYEEV LEDEVREDIA NGKLGNNSWL ASSELLPINK GILKHALRRH ARQTFPHSLT
TLCMNYIENT PKSRKVFTRR SLSSGARK