| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0272 |
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| Symbol | |
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| ID | 6376731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 309971 |
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| End bp | 313342 |
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| Gene Length | 3372 bp |
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| Protein Length | 1123 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642681455 |
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| Product | hypothetical protein |
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| Protein accession | YP_001957440 |
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| Protein GI | 189501723 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.580517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGCAA AAGATTTAAT TTCCCTGTAT ACAAGAAATA ATTGGATAAA AGAATTACTA
AATAACATAT GTAATTCCTC ACATTCATTT ATTCGTTTAA AAGGCCTAGC TGGTAGCTTA
CCGGCTATAT TAGGTGCTGC TTTACATCAA TTAAATAATT TTACACAGAT ATTTATTTTA
CAGGATAAAG AGGCAGCTGC TTATTTATAT ACAGACTTGC TTAATTTACT TGGCCCTCAG
AAGGTAGTAC TATATCCAGC TATAGAATAT CAGACAGACA GCAAAGCTTT TTTAGATACT
GCAGCTAACT TAATGCGTAA TGAAATTTTA CAGCAGCTTA GACAAAGCAA TAAAGTCTCT
AAAATTATTG TGACATACCC AGAAGCCATT GTTACAAAAG TGATAAGCCA AGATAGTTTA
ACTAAAAATA GCTGGAGTAT ACAACCAAAG GAAAAACTAG TTTTATCAGA GTTTGTTGAT
ACACTTATTG ACAAAGGGTT TGAAAAAGTA GATTTTGTAT ATGAAGCAGG CCAGTTTGCA
ATTAGGGGTG GCATTATAGA TATTTTTTCT TATGGCAGCC AGCTTCCATA TCGAGTAGAG
CTGCTAGGAA ATGAGATAGA AAGTATACGT CTTTTCAATC CTTCTAATCA ACTTTCAACA
GAGAAGGTAA AAGAAGCTAT CTTACTTTCT TATACTGAAC CATTTAATAC AACCATAACC
TATCAATCTT TCTTTGATTA TTTACCTGAA GAATCAGTTG TGTGGTTAAA GGATTATGAA
ATGGTGATTA ATGCACTGAA AAATAAAAGA GAGGAATTAA ATGGCCGCCC TCAACAGATA
AGTAACTCAG CCACTTCTAG TACTACAGAG AAGGTAGAAT TAGACAAAAT ATTATACGAG
CATATCGAAG ACTGGGAGAA AAATATAAGA AGATTTACTT GTGTAGAATT TGGGAATAGA
TTTTACCTGG AAAGTGAAGA AGTAATTGAG TACAAAGCTT CATCACAGCC TAGTTTTAAC
CAACAACTTA GTTTATTAGC TGAAAATCTA CAGCAAAATC AAAAGCTAGG ATTAGAAAAC
CTTATATTGG TTGAATCTAC AAGCCAGTTT GAGCGTTTGG CTAATATGCT TGAAGAGCTG
GATATAAAAG TACAATTCAA GGCATTGCCA ATAGGGATCA GCCAAGGTTA TATAGATTAT
CAGATAGGTA TAGCGTGCTA TACAGAACAT CAAATATTTG GCCGCTATTA CCGTTATAAA
TCACCTCAAA AATATTCTAA GAGCCAAGCA TTTACACTGA AAGAGCTTAA TAATCTACAA
CCAGGTGATT ATGTAGTACA TATCGATCAT GGTATTGCTC GTTTTTCTGG GCTTAGTAGG
GTTTCTGTAA ATGATAAAGT GCAAGAAGTA CTAAGGCTTG TATATAAGGA TAATGATGTC
GTTTACCTTA GCCTACATGC TTTGCATAAA ATTTCTAAAT ATACAGGTAA AGAAGGCATT
GTTCCTACAA TGAGCAAGCT TGGTAGTGGT GCTTGGGAGC AGAAAAAGTC AAAGGTAAAG
CATAAGGTGC AAGTTATTGC CAAAGAACTT ATTCAGCTAT ACAGTAAGCG AAAATATGCT
CCTGGATTTG CATTTAGTAA AGATACATTC TTACAAGCTG AAATGGAATC ATCTTTTATA
TATGAAGATA CTCCTGACCA AGCATCTGCT ACTGCAGATG TTAAAAAAGA TATGGAGGCA
CCACATCCTA TGGATAGATT GGTATGTGGT GATGTAGGGT TTGGAAAGAC AGAAGTAGCT
ATTCGAGCGG CTTTTAAGGC TGTATACGAC CGTAAACAAG TTGCTGTATT GGTCCCTACC
ACTATTTTAG CCTTACAACA CTATGAATCT TTTAAGAACA GATTATCTAA TTTTCCTGTT
GATGTTAAGT ATGTCAATCG ATTTAAATCC AAGCAGGAGA TTAAAAGAAT CCAAGAAGCT
GCAGCACAAG GTAAAATAGA TATACTAATT GGTACCCATA CAATTTTAGG TAAAGCATTT
GAGTTTAAAG ATTTGGGCTT ATTAGTTGTT GACGAAGAGC AAAAGTTTGG AGTAAAGGCT
AAAGATCGTA TTAAAGAGTT TAAGGTAAAT GTAGATGTGC TAACCCTTAC TGCAACACCT
ATTCCTAGAA CATTGCATTT TTCATTGATG GGTGCCAGGG ATTTAAGTAT TATTGCTACC
CCTCCTTCTA ACAGACAACC TGTGCAAACT TCCATACACA CTTTTGACAA AAAGATTGTA
CAAGATGCAA TCCACTACGA GGTACAACGA GGTGGACAAG TATTTTTTGT ACATAATCGA
ATAAATAATA TTCAAGAAGT AGCAAATATG CTTTATAAGC TAGTTCCTGA ATACAGAATT
GGTATTGCAC ATGGCCAGAT GGATGGAGAC CAGCTAGAGA AAAAGATGCT TACTTTTATA
GCTGGAGGAT ATGATATTTT GGTTTCAACC AACATCATAG AATCAGGCCT AGATATTCCC
AATGCCAATA CCATTATTAT CAACGATAGT CATATGTTTG GGCTTTCAGA TTTGCACCAA
ATGCGTGGGA GGGTTGGCAG GTCTAACAAG AAGGCTTTTT GTTATTTAAT AGCTCCACCT
AACTCTAGCC TTACTGAAGA AGCCCGCAAG CGATTAAGTA CTTTAGAGGA ATTTACAGAA
TTAGGAGATG GATTTAAAGT GGCTATGAGA GATTTGGATA TTCGAGGTGC CGGTAATTTG
TTAGGCGCTG AACAGAGTGG ATTTATAGCC GATGTAGGAT TTGAAGCCTA TTGTAAAATT
CTAGATGAAG CAGTGCAAGA ACTTAAAGAA AGTGAATTCA AAGAGTTATT CGCAGAAGAG
CTAGCTCGTA AAGGTCAGTT GTCTAATATA GATTGTACGC TTGAAACAGA TTTGGAATTA
TTAATTCCTA CTAGCTATGT AAACAATGAT ACCGAACGTC TAAGGCTTTA TACTAAACTA
GATAACATAG AAAACGAAAA AGGTTTGGAA AACTTCCAGG TTGAAATACA AGATAGATTT
GGTGCTCTAC CAACGTCAGT CCAAGAACTT ATTAAAGCTG TAAAACTTAG ATGGGTAGCT
AAAAAGCTAT GTTTACAGAA GATAAGGCTA AAAGATAATA TTATGCGGTG TTATTTTATT
CCTTCGCCAC CAAAAACTGT TTTCTCTGAA ACCTTGAACT GTATACTTAA TTATATACAG
GAACATCCTC AACGTTGTCA GCTGAAAGAA CTTAAAAATC AACTAAGCTT AACTATACAT
GCCATTAATA CTGTAGAGGA AGCATATGAA ATTTTGAAAT GTCTATGGAA TAATAAAGAG
TTTTGTGATT AA
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| Protein sequence | MQAKDLISLY TRNNWIKELL NNICNSSHSF IRLKGLAGSL PAILGAALHQ LNNFTQIFIL
QDKEAAAYLY TDLLNLLGPQ KVVLYPAIEY QTDSKAFLDT AANLMRNEIL QQLRQSNKVS
KIIVTYPEAI VTKVISQDSL TKNSWSIQPK EKLVLSEFVD TLIDKGFEKV DFVYEAGQFA
IRGGIIDIFS YGSQLPYRVE LLGNEIESIR LFNPSNQLST EKVKEAILLS YTEPFNTTIT
YQSFFDYLPE ESVVWLKDYE MVINALKNKR EELNGRPQQI SNSATSSTTE KVELDKILYE
HIEDWEKNIR RFTCVEFGNR FYLESEEVIE YKASSQPSFN QQLSLLAENL QQNQKLGLEN
LILVESTSQF ERLANMLEEL DIKVQFKALP IGISQGYIDY QIGIACYTEH QIFGRYYRYK
SPQKYSKSQA FTLKELNNLQ PGDYVVHIDH GIARFSGLSR VSVNDKVQEV LRLVYKDNDV
VYLSLHALHK ISKYTGKEGI VPTMSKLGSG AWEQKKSKVK HKVQVIAKEL IQLYSKRKYA
PGFAFSKDTF LQAEMESSFI YEDTPDQASA TADVKKDMEA PHPMDRLVCG DVGFGKTEVA
IRAAFKAVYD RKQVAVLVPT TILALQHYES FKNRLSNFPV DVKYVNRFKS KQEIKRIQEA
AAQGKIDILI GTHTILGKAF EFKDLGLLVV DEEQKFGVKA KDRIKEFKVN VDVLTLTATP
IPRTLHFSLM GARDLSIIAT PPSNRQPVQT SIHTFDKKIV QDAIHYEVQR GGQVFFVHNR
INNIQEVANM LYKLVPEYRI GIAHGQMDGD QLEKKMLTFI AGGYDILVST NIIESGLDIP
NANTIIINDS HMFGLSDLHQ MRGRVGRSNK KAFCYLIAPP NSSLTEEARK RLSTLEEFTE
LGDGFKVAMR DLDIRGAGNL LGAEQSGFIA DVGFEAYCKI LDEAVQELKE SEFKELFAEE
LARKGQLSNI DCTLETDLEL LIPTSYVNND TERLRLYTKL DNIENEKGLE NFQVEIQDRF
GALPTSVQEL IKAVKLRWVA KKLCLQKIRL KDNIMRCYFI PSPPKTVFSE TLNCILNYIQ
EHPQRCQLKE LKNQLSLTIH AINTVEEAYE ILKCLWNNKE FCD
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