| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0238 |
|---|
| Symbol | |
|---|
| ID | 6376491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 268549 |
|---|
| End bp | 269241 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642681425 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957410 |
|---|
| Protein GI | 189501693 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1738] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.911643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTACTAG AACAGTTTAG GGTGCAACAA CCTTCTTTAT CAGAACGGAT ATATGTAATA
TTGGTTGGTC TTTTTCTAGG TGTATTGTTG CTAACTAACA TTATTACCAG CAAGTATATT
ACTATTGGGC ACTTAACTCT TACAGCAGGT GCTATTACTT ATCCCTTTAC CTTTTCTTTG
TTAGATATCA TTTCCGAAGC ATATGGAAAA AACAAGGCAA AAATGGTGAT CTGGATGGGA
TTAATGGCCA GCCTATTTAT GACTTTTATA ACGTACTTAG CAAATATCAT CCCTATATAT
GAACATTCTC CAGTACCTCA ATCTGCATTT CAACTAGTGT TTGGATTTAC GCCAGGTATT
GTCCTAGGAT CTATGGTCGC ATATATGATA GCACAATTGA TAGATGTTTA TTTATTCGAG
TTAATCCGGC GTGTAACAAA AGGTAAGTAT TTATGGCTTA GAAATAATAT TTCTACATTA
GTTGGACAAC TTTTTGATAC AGCGATTTTT GCGGGTATAG CTTGGATGAT TTGGCCTTTA
TTAGGGCTAA CGCAAGGTAT TGAACCTATA TCCTGGAATA CTTGGTATCA GATCACCATC
AATGAGTATA TGTTTAAAGT GTTTTTCTCC TTTATTAATA TACCACTTGT TTATATAGGC
GTTTATTTGG TTAAGCGTTA TATAAAAGTC TGA
|
|---|
| Protein sequence | MLLEQFRVQQ PSLSERIYVI LVGLFLGVLL LTNIITSKYI TIGHLTLTAG AITYPFTFSL
LDIISEAYGK NKAKMVIWMG LMASLFMTFI TYLANIIPIY EHSPVPQSAF QLVFGFTPGI
VLGSMVAYMI AQLIDVYLFE LIRRVTKGKY LWLRNNISTL VGQLFDTAIF AGIAWMIWPL
LGLTQGIEPI SWNTWYQITI NEYMFKVFFS FINIPLVYIG VYLVKRYIKV
|
|---|
| |