Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0222 |
Symbol | |
ID | 6376666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 246014 |
End bp | 246940 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642681410 |
Product | hypothetical protein |
Protein accession | YP_001957395 |
Protein GI | 189501678 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR03522] gliding motility-associated ABC transporter ATP-binding subunit GldA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.238657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATAG ATATATCTAA ACTTTCCAAG CATTTCCAAA ACAAAACAGT TGTAGATCAC CTTACTTTTA GAGTTAAAAA AGGTGAAATT TTAGGTTTAT TAGGCCCAAA TGGTGCTGGT AAATCTACTA CTATGAAAAT GTTGACAGGT TATATACAAC CTTCTGAAGG AAAGATCTAT ATATGTGGTT ATGACCTTAA TAAAGAGTCA CTTAAAGCTA AAAAGAATAT AGGATATTTA CCTGAACATA ATCCTTTGTA TTTAGATATG TATGTACACG AGTACCTACA ATTTATGGGT AGTATCCATG GATTAGGTAA GAGAGCGTGT ATACAAAGAG CGCGGTTGGT TGTGGAACAA TGTGATATAG GAGATGTACA AAACAAAAAG CTGGGTGTAC TTTCTAAAGG GTATCGACAG CGAGTAGGGT TAGCTCAGGC ACTCATGCAT GACCCTACAG TGTTGGTGTT GGATGAGCCT ACAACAGGGT TGGATCCTAA CCAACTACAT CACATTCGCC AGCTTATTAA GGAACTTGGA CGTGAAAAAG CTATTATATT TTCTACACAT ATCATGCAAG AAGTAGAAGC AGTTTGTGAC CAGGTTATTA TTATGCATCA TGGTAAACTG TGCTTGACAG CCACACTAAG TGAATTAGAT CAACAGTGTA GTGATCAGCT TATAATATCG TTTAGAGAAC CAATACCTGT AGATGCACTT TCTAGTATTG AAGGAATAAA TAAACTTGAA ATTTTAGATG CACATAAATG TAAATTATAC GTTAGCAACA GTAAAGATAT TTATGAACAT ATTTTCTGCT TTACTAAACA ACAAGGGCTT ACACTACAAC GATTAGAGCA TAAAAGAGAG AGTCTAGAAG AGATCTTTAC ACAAATTACT AAAGTAGACA GCACTTCTAT TACTTAA
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Protein sequence | MSIDISKLSK HFQNKTVVDH LTFRVKKGEI LGLLGPNGAG KSTTMKMLTG YIQPSEGKIY ICGYDLNKES LKAKKNIGYL PEHNPLYLDM YVHEYLQFMG SIHGLGKRAC IQRARLVVEQ CDIGDVQNKK LGVLSKGYRQ RVGLAQALMH DPTVLVLDEP TTGLDPNQLH HIRQLIKELG REKAIIFSTH IMQEVEAVCD QVIIMHHGKL CLTATLSELD QQCSDQLIIS FREPIPVDAL SSIEGINKLE ILDAHKCKLY VSNSKDIYEH IFCFTKQQGL TLQRLEHKRE SLEEIFTQIT KVDSTSIT
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