Gene Aasi_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0213 
Symbol 
ID6376292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp232679 
End bp233539 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content38% 
IMG OID642681401 
Producthypothetical protein 
Protein accessionYP_001957386 
Protein GI189501669 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAA CCTTGACACA ATCTATTTGG TTAGAAACCC TTCGTAGAAT GGCTAAAAGT 
AAGCTTACTA CAGCAGCTTT AATCATTGTG TTAATTTATG CTGTAGTGGC ACTGCTAGCA
TACTGTGGTA TTATAGCCGC AAACTGGAGC CAGGAAGTGG GAACTTCCTA TGAAGCACCT
AATATTCAAC ATTGGTTTGG TACAGATATT TTTGGGAGAA GTGTTTTAAG AAAAATCATC
AAGGGAGCAC AAGTTGCTAT GAATGTTGGG TTTGTAGTAA GTATGATAGC TATTTTAATT
GGCGTAGTAT TAGGAGCTAT AGGGGGTTAC TTTGGTGGGG TAGTAGATGA AATGATTGTT
TGGTTATGTA GTACCATGGC CTCAATTCCA AATATCATGC TCCTTATATC GCTTACTTTT
ATTTTAGGAA AAGGAATTCT CGCTATATAT ATAGCTTTGG GCATGACTAA CTGGGTGGAA
CTTTGTCGCT TGATTAGAGG AGAAGTAATC AAACATAAGG ATAGGGAGTA TGTACAGGCA
GCCACTGCAA TTGGTGCTAG CCATGTTAGT AAGTTATGGT GGCATATTTT ACCTAATGTC
CTTCATATAG TTATTATCCA GTTCTCAGGT ATATTTCAGA TTGCCATTAA ATCAGAGGTA
ATCCTTTCAT ATTTAGGATT AGGAGTACAG AATAGCCCTA GTTGGGGTGT AATGATTAAT
GATGCTAAAG TAGAGCTTAT GCAAGGTGTT TGGTGGGAAA TTGCTTTTGC TACTGTAGCC
ATGTTTCTAA TAGTGCTAGC TTTTAATATC CTTAGCGATG CACTACGAGA TGCGTTAGAC
CCTAAACTAA GAGGAAAATA A
 
Protein sequence
MNQTLTQSIW LETLRRMAKS KLTTAALIIV LIYAVVALLA YCGIIAANWS QEVGTSYEAP 
NIQHWFGTDI FGRSVLRKII KGAQVAMNVG FVVSMIAILI GVVLGAIGGY FGGVVDEMIV
WLCSTMASIP NIMLLISLTF ILGKGILAIY IALGMTNWVE LCRLIRGEVI KHKDREYVQA
ATAIGASHVS KLWWHILPNV LHIVIIQFSG IFQIAIKSEV ILSYLGLGVQ NSPSWGVMIN
DAKVELMQGV WWEIAFATVA MFLIVLAFNI LSDALRDALD PKLRGK