| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0212 |
|---|
| Symbol | |
|---|
| ID | 6376419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 231671 |
|---|
| End bp | 232675 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642681400 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957385 |
|---|
| Protein GI | 189501668 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA GAATTTTAAC TGTAAAAAAT TTAGTTACCC AGTTCAATAC TGAACAAGGA
TTGATAAAAC CTGTCAATGA TGTCTCTTTT GAGATATATA AGGGTAAAAC ATTAGGTATT
GTAGGAGAGT CAGGATCCGG TAAGTCCATG ACTGCACTTT CTATCATGCG CCTGATTGCT
CCGCCTATAG GTAAAATCGT TGGGGGCAAT ATCTTTTTTG AAGATAAAGA TTTATTGCAA
CTGTCAGATA AAGAAATGCG TGCTATAAGG GGAAATAAGA TAGGTATGAT TTTTCAAGAG
CCTATGACCT CTCTTAATCC AGTATTTACT GTTGGATATC AGATCAAAGA AGCTTTAACC
CTTCATCAGA GAATGTCTTT TAAAGATGCA AAAGAACAGA CTATAGAGCT TTTGAAGCTA
GTGGGTATTC CAGCTCCTGA GAAAAGAATA TATGAGTATC CACATCAACT GTCTGGTGGA
ATGCGACAGA GAATTATGAT AGCTATGGCT TTGTCTAGTA AGCCGTCTGT ATTAATTGCA
GATGAGCCTA CGACAGCTTT AGATGTAACC ATACAAGCTC AAATATTAGA ATTAATGGTT
AATCTGCAAG AAGAACTTAA CATGGGTATT ATATTAATCA CTCATGATTT AGGAGTAGTA
GCTGAGATGT GTCATGAAGT AGCTGTTATG TATGGTGGCA GAATAGTAGA ACAGGCATCT
GTACAGGATT TATTTTCTTG TCCTAAACAT CCTTACACAC GAGGGCTACT AGCATCCATC
CCTTCATTAG AGGTTGGGAA AGATCATACG CAGCGCCGTT TAGAAACCAT TAAGGGTACC
GTACCTGCTT TAAACAAACT TCCTTTAGGC TGCAGTTTTC AAGACCGTTG TTACAACGTC
CAGGCAGACT GTAAAGGAGA AAAAGGTACT CCTCCTTTAG AAGAAAAAGC TCCAGCTCAT
CTGGCTGCTT GTTTTCATCC TTTAAACGAT ATTGCATCTA AATAG
|
|---|
| Protein sequence | MFERILTVKN LVTQFNTEQG LIKPVNDVSF EIYKGKTLGI VGESGSGKSM TALSIMRLIA
PPIGKIVGGN IFFEDKDLLQ LSDKEMRAIR GNKIGMIFQE PMTSLNPVFT VGYQIKEALT
LHQRMSFKDA KEQTIELLKL VGIPAPEKRI YEYPHQLSGG MRQRIMIAMA LSSKPSVLIA
DEPTTALDVT IQAQILELMV NLQEELNMGI ILITHDLGVV AEMCHEVAVM YGGRIVEQAS
VQDLFSCPKH PYTRGLLASI PSLEVGKDHT QRRLETIKGT VPALNKLPLG CSFQDRCYNV
QADCKGEKGT PPLEEKAPAH LAACFHPLND IASK
|
|---|
| |