| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0196 |
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| Symbol | rplD |
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| ID | 6376421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 209069 |
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| End bp | 209701 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642681385 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001957370 |
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| Protein GI | 189501653 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.371225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTGT CTGTATTACA ATATACGGGA AAAGACACAG GTAGAAAGGT CGTACTTTCT
GACACCATCT TTGGAATTAC CCCTAATGAT CATGCTATTT ATTTAGATGT TAAAAATATC
TTAGCTAATA AAAGGCAAGG TACTCATAAG TCTAAAGAAA GAGGTGAAAT AGCAGGTTCT
ACCAAAAAGA TAAAAAAACA AAAAGGTACT GGAACAGCAC GTGCAGGTAG TATTAAGTCT
CCTATATTTA GAGGAGGGGG GCGTGTATTT GGTCCCAAAC CTAGGGATTA TGGATTTAAG
CTTAATAAAA AGCTTAAAAA ATTAGCTAGA AAATCTGCTC TTACCTATAA AGCTCAGCAA
GGTAATATCT CAGTTTTGGA AGACTTTTCT TTTGAAATGC CTAAAACTAA GATGTACTTG
GAAATGCTAC AAAATTTAAA TATGGCAGAT CAAAAGACCT TATTGATTTT GCCTGCTGTA
GATAAGAATC TAGTACTAGC TAGCCGAAAC TTACCTAATA CGTCCGTTGC ACTTGTAGAG
CAAATTAATA CCTATGATTT ACTCTACTCC AAAAAGATCT TAATCAGTGA GACGGCTTTG
TCGAAACTAA CCGAAAATTT TAACAACGCA TGA
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| Protein sequence | MELSVLQYTG KDTGRKVVLS DTIFGITPND HAIYLDVKNI LANKRQGTHK SKERGEIAGS
TKKIKKQKGT GTARAGSIKS PIFRGGGRVF GPKPRDYGFK LNKKLKKLAR KSALTYKAQQ
GNISVLEDFS FEMPKTKMYL EMLQNLNMAD QKTLLILPAV DKNLVLASRN LPNTSVALVE
QINTYDLLYS KKILISETAL SKLTENFNNA
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