Gene Aasi_0178 details

Gene Information

• Locus tag: Aasi_0178
• Symbol: rplO
• ID: 6376504
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Amoebophilus asiaticus 5a2
• Kingdom: Bacteria
• Replicon accession: NC_010830
• Strand: -
• Start bp: 201397
• End bp: 201855
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 642681367
• Product: 50S ribosomal protein L15
• Protein accession: YP_001957352
• Protein GI: 189501635
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 0.127844
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAACTAA ATACACTTAA GCCCGCAAAA AATTCTGTTA AGCAAAATAC AAGGTATGGT 
AGGGGGCAAG GTTCTGGTAA AGGTGGTACT TCTACTAGAG GACACAAAGG AGCAAAGTCA 
CGCTCTGGTT ATAAAAGTAA GCCAGGTTTC GAAGGAGGCC AGCTTCCTTT GCAACGCAGG 
TTGCCTATGT ATGGTTTTAA GAATCCTAAT AGAGTCAGCT ATAAGCCTAT TAACCTAGAT 
ACTATACAGC AGCTAGCTGA AAAAGCTCAG CTTACAGTTA TTAATCCTGA AGTTTTACAC 
CAACATGGTC TCGTTAGTAA ACGTGATAAA TGCAAAATTC TTGGCAATGG TCTGTTGAAA 
ACAAAATTAG AAGTAACAGC TCATGCATTT TCAGCATCAG CATCAGCAGC CATAGAAAAA 
TTGGGTGGGA AAGCGAACAT CCTGAATATA TATGCGTAA 

 

Protein sequence

MELNTLKPAK NSVKQNTRYG RGQGSGKGGT STRGHKGAKS RSGYKSKPGF EGGQLPLQRR 
LPMYGFKNPN RVSYKPINLD TIQQLAEKAQ LTVINPEVLH QHGLVSKRDK CKILGNGLLK 
TKLEVTAHAF SASASAAIEK LGGKANILNI YA