| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0171 |
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| Symbol | |
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| ID | 6376291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 197500 |
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| End bp | 198102 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642681360 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001957345 |
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| Protein GI | 189501628 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.295675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGAT ATATAGGTCC TAAAGCTAAA ATTTCTAGAA GATTTAATGA GCCCATATTT
GGGCCTAGCA AGGCACTTCA GAAAAAGAAT TACCCTCCAG GTCAACATGG TAAAATTCGT
AAAAAGAAGT CTGAATATGC CATCCAGCTA ATGGAAAAAG GAAAAGCCAA GTATATATAT
GGATTACTAG AAAAGCAATT TGCTAACCTT TTCTATAAAG CAGCTAAGAA GAAAGGAGTT
ACAGGCGAAC TGTTGCTACA ATACTTAGAA ACAAGGCTTG ATAATGTCGT ATATCGCTTA
GGTATAACAC CTACTCGGAG ATCCGCTAGA CAGTTAGTGT CGCATAAGCA TATTACTGTA
AATGGTAAAA TAGTTAATAT TCCTTCTTAT GCATTAAAAG TGGGTGATAT AATTGGCTTA
ACCGAGAAAA CAAAGTCATC AAACGCTATT ACCGAGCGTA TTTCTAGCCA TTCACATAAT
AAAAATAACT GGTTAGAATG GGATAGTAAA CAGATGATTG GTAAAGTCAT GTCACTGCCA
CATAGAGAAG AAATCCCTGA AAAAATTAAT GAGCAAAGTA TTGTTGAGCT ATACTCTAAA
TAA
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| Protein sequence | MARYIGPKAK ISRRFNEPIF GPSKALQKKN YPPGQHGKIR KKKSEYAIQL MEKGKAKYIY
GLLEKQFANL FYKAAKKKGV TGELLLQYLE TRLDNVVYRL GITPTRRSAR QLVSHKHITV
NGKIVNIPSY ALKVGDIIGL TEKTKSSNAI TERISSHSHN KNNWLEWDSK QMIGKVMSLP
HREEIPEKIN EQSIVELYSK
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