| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0169 |
|---|
| Symbol | |
|---|
| ID | 6376340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 195801 |
|---|
| End bp | 196385 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642681358 |
|---|
| Product | 50S ribosomal protein L17 |
|---|
| Protein accession | YP_001957343 |
|---|
| Protein GI | 189501626 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0203] Ribosomal protein L17 |
|---|
| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.474086 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACACG GTAAAAAATT TAATCATCTG AGTAGGCCTG CGTCCCACCG CAAGGCTCTA
TTATCTAACC AGGCTAAGTC CCTTATTTTA CATAAACGTA TTATTACTAC CGTAGCCAAA
GCTAAAGCAC TTAGGAAGTT TGTAGAGCCT ATTATTACAA AGGCTAAACA AGATTCTACG
CATGCAAGAA GAGTAGTGTT CTCCTATTTT CAAGATAAAG AGCCCGTTAA ACTACTTTTT
AATGAGGTTG CTCCTAAGAT AGGGGATAGA CCGGGAGGTT ATACACGTAT TATTAGGCTA
GGAAATCGCC TAGGGGATAA TGCAGAAATG TGTATGATGG AGTTAGTAGA CTATAATACA
TACTTGCAAA AGGCAGCAGA GCCAAAACAA ACCAAGGCTA GAACTCGAAG GGGAAAAGGA
AAATTAGGTG CTACTACGAC TGTGAGTTCT GAAAAAACAC AGCCTAACAC TCAAGATATG
GCTACTCAAG CTAAACCAGT TGAAAATACT CAGGTAGAAG GAGCAGATGA GCAAGAAGCT
TTAGATACAC AATCTCCTGA ACAAACTAAT AAACAAGAAG AATAA
|
|---|
| Protein sequence | MRHGKKFNHL SRPASHRKAL LSNQAKSLIL HKRIITTVAK AKALRKFVEP IITKAKQDST
HARRVVFSYF QDKEPVKLLF NEVAPKIGDR PGGYTRIIRL GNRLGDNAEM CMMELVDYNT
YLQKAAEPKQ TKARTRRGKG KLGATTTVSS EKTQPNTQDM ATQAKPVENT QVEGADEQEA
LDTQSPEQTN KQEE
|
|---|
| |