| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0139 |
|---|
| Symbol | infB |
|---|
| ID | 6376551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | + |
|---|
| Start bp | 159929 |
|---|
| End bp | 162655 |
|---|
| Gene Length | 2727 bp |
|---|
| Protein Length | 908 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642681329 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_001957314 |
|---|
| Protein GI | 189501597 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGAAG AAAAAACAAT ACGTTTAAGT CAAGTAGCAC GTAAGCTCAA TGTAGCAACC
ACTACGATAG CAGCGTATTT ATTAGAAAAA GGCTTTCGTG TAGAAAATAA GCCTAACACA
AAAATCACCT TAGAACAGTA CAAGATACTA GCTGAGGAAT TTGCTGACTC TGCCATGGAC
AAGGAAGAAG CAGCAGAATT AGTAATTGGG CAAAGTTATG AAAAAGAGCC TAAGGTTATT
GCTAAGCAGC AAGAACCCAT TAAACACGTC CATCCTAAAG AAAAACAGGT AGAAATTGAA
AAAATTAGCC TTCCTGTTAT CGACGCACCT ACTATTATAG AACACAAAAT TATAGAACAC
AAAACAGAAG AGCCCCCTAT ATTACAACCT GAACTGCCAA CTGAAGAAAA AGAAGAACTA
GAGGTAATAG AATCTCCTCA AGCCCCCCAA GAAGAGCTAA AACCTGAGTT AGAAACAGAA
GTACAGGAAC AGGATAAAGA GATTCAACAA GAACTAGATG ATACAGCAAA AGTAGAGCAA
GCACCTATTA CTAAAGGACC TGAAAAAATA GACTTTTCTA AGCAAGGAGA GTTTAAAGGA
GTTACTGTAC TAGGGAAAAT AGAATTAGCC GAAAAAAAGG AGCCAAAAAA ATTTCAGCAA
GTAGCCTCAT CTGACATAGA TAAAAAGAAC AAAAAAAGGC CTAGAAAAAG AGTTGCTTCT
GAAACAGGAT TACCTAGCTC AGGTAAAAGA GAAGAGGAGG CTAATAGATA TAAGCCAAAA
GGCAAAGTTA CTAACAAGAC TCCTGAAGCT CCTAAGACCG CCGTATCAGA AAAACAAATA
CAAGATCAAA TAAAAAGTAC ACTAGCTAAG TTAGGAGGAG GTAAAAATGT TGCTAGCCGA
GCTAAGTATA GAAGAGAGAA AAGATCCTTA CTAGCAGAAG AGCAGGCAGA AGAGCGTTTA
CAAGCTGCTA AAGATGCTAA AAAACTGCAA GTTACAGAGT TTATTGCTGC CAGTGATCTA
GCATCTTTAA TGGGTGTTTC TATTAATCAA CTACTATCAA CTTGCATGAA TTTAGGTATG
CTGGTATCTA TTAACCAACG ACTAGATGCA GAAGCTATTA CAATTATTGC AGATGAATTT
GGATACCAAG TAGCATTCAC AGATGTAAAA ACGCAAGAAT TAGAAGAGGA AGAAGAAGCC
AATCCAGAAG ATTTAGTAGA GCGAGCCCCA ATTGTAACAA TTATGGGACA CGTGGATCAC
GGAAAGACTT CTTTACTTGA CTATATCAGA AATACACAGA TTACCAAAAC AGAGGCAGGG
GGCATTACCC AGCATATAGG TGCATATGAG GTAGTTACAG AAAGTGGCAA GCATATAGCA
TTTCTTGATA CCCCTGGACA CGAAGCCTTT ACAGCCATGC GTGCTCGTGG TGCTAAATTA
ACAGACATTG CTATTATTGT AATAGCTGCC GATGATGGTG TAAGACCGCA AACCAAAGAA
GCGATCAACC ACGCTAAACT AGCAGGGGTA CCTATCATCA TAGCTATTAA CAAGATGGAC
AAACCTCAGG CCAATCCAGA GAGGGTAAAA GAAGAGTTAG CGCATCTAAA CATTTTAGTA
GAAGATTGGG GAGGGAAATA TCAAAGCCAA GGAGTATCTG CTATAAGCGG TGAAGGAGTA
AAAGAGTTAT TAGAAAAGAT TCTTTTTGAA GCTGAGTTAC TAGAACTTAA AGCAAATTCT
CACAAGAAGG CTCGAGGCAC AGTGATAGAA GCTTCTTTAG ATCAAGGGCG CGGATATCTA
GCCACCATCA TGGTTCAAGA TGGCAATTTG CGTATAGGCG ATGTAGTACT AGCTGGGGCT
TATTATGGTA AGATTAAAGC TATGTTTGAT TATCAGGGCA AACCTGTTAA GCAAGCAGGC
CCTTCTACTC CTATGCAGAT ATTAGGCCTT AATGGAGCCC CTCAAGCTGG TGACTTATTT
AGGGCTATGA ATACTGAAAA AGAGGCTAGA GATATTGCTA CCCAAAGGCA ACAAATTTTA
AGAGAACAAG GATTTAGAAC GAAGACTCAT ATTACACTTG ATGAGATAGG AAGACGATTG
GCTATTGGCA ACTTTAAAGA GCTTAATATA ATTTTAAAAG GGGATGTAGA TGGTTCAGTA
GAAGCACTTT CAGACTCACT ACTTAAGTTG TCTACTGAAG AAATTAAAGT CACTATCTTA
CATAAAGGTG TAGGTGCCAT TGTAGAATCA GATATTTTAT TAGCGGCAGC TTCTGATGCT
ATTATAATAG GCTTCCAAGT ACGTCCTACT CCACCTGTAC GTAAATTGGC TGAAAAAGAA
GGTATCGAAA TCCGTCTTTA CTCCATCATC TATGATGCAA TCAATGATAT CAAAGATGCT
ATGGAAGGAA TGCTAGCTCC TACTATAGAG GAGATAATTA CAGGTAGTGC CTCAGTAAGA
GAGATATTTA AAATTACTGG AACAGGTACT GTAGCAGGTT GCTACGTTAC TGAAGGATAT
ATCAAGAAAA ATAATTCAAT CCGTGTTATT AGGGATGGTA TTGTAATCTA TACAGGTTCT
ATTAAGCATT TAAAACATTT CAAAGAAGAA ATGCAGCAAG TAAAAACGGG CTTTGAGTGC
GGTATTAGCA TTACAAATTT TAATGACCTT AAGGTTAATG ATGTCATTGA AGGATTTGAA
CAAAAAGAGG TTGAACGCAA GTTATAA
|
|---|
| Protein sequence | MVEEKTIRLS QVARKLNVAT TTIAAYLLEK GFRVENKPNT KITLEQYKIL AEEFADSAMD
KEEAAELVIG QSYEKEPKVI AKQQEPIKHV HPKEKQVEIE KISLPVIDAP TIIEHKIIEH
KTEEPPILQP ELPTEEKEEL EVIESPQAPQ EELKPELETE VQEQDKEIQQ ELDDTAKVEQ
APITKGPEKI DFSKQGEFKG VTVLGKIELA EKKEPKKFQQ VASSDIDKKN KKRPRKRVAS
ETGLPSSGKR EEEANRYKPK GKVTNKTPEA PKTAVSEKQI QDQIKSTLAK LGGGKNVASR
AKYRREKRSL LAEEQAEERL QAAKDAKKLQ VTEFIAASDL ASLMGVSINQ LLSTCMNLGM
LVSINQRLDA EAITIIADEF GYQVAFTDVK TQELEEEEEA NPEDLVERAP IVTIMGHVDH
GKTSLLDYIR NTQITKTEAG GITQHIGAYE VVTESGKHIA FLDTPGHEAF TAMRARGAKL
TDIAIIVIAA DDGVRPQTKE AINHAKLAGV PIIIAINKMD KPQANPERVK EELAHLNILV
EDWGGKYQSQ GVSAISGEGV KELLEKILFE AELLELKANS HKKARGTVIE ASLDQGRGYL
ATIMVQDGNL RIGDVVLAGA YYGKIKAMFD YQGKPVKQAG PSTPMQILGL NGAPQAGDLF
RAMNTEKEAR DIATQRQQIL REQGFRTKTH ITLDEIGRRL AIGNFKELNI ILKGDVDGSV
EALSDSLLKL STEEIKVTIL HKGVGAIVES DILLAAASDA IIIGFQVRPT PPVRKLAEKE
GIEIRLYSII YDAINDIKDA MEGMLAPTIE EIITGSASVR EIFKITGTGT VAGCYVTEGY
IKKNNSIRVI RDGIVIYTGS IKHLKHFKEE MQQVKTGFEC GISITNFNDL KVNDVIEGFE
QKEVERKL
|
|---|
| |