Gene Aasi_0138 details

Gene Information

• Locus tag: Aasi_0138
• Symbol: nusA
• ID: 6376489
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Amoebophilus asiaticus 5a2
• Kingdom: Bacteria
• Replicon accession: NC_010830
• Strand: +
• Start bp: 158679
• End bp: 159914
• Gene Length: 1236 bp
• Protein Length: 411 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 642681328
• Product: transcription elongation factor NusA
• Protein accession: YP_001957313
• Protein GI: 189501596
• COG category: [K] Transcription
• COG ID: [COG0195] Transcription elongation factor
• TIGRFAM ID: [TIGR01953] transcription termination factor NusA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAGAGTA AAAAACTAAT TGAGACATTT GCGGAATTTG CTAGATCTAA AAATGTAGAT 
CGGCCTACGG TAATCAGAAT CTTGGAAGAA GTATTCAAGG CAATGATTCA TAAAAAGTTT 
GGAACAGATG ATAATTTTGA CATTATTATC AACCTAGACC AAGGCGACTT ACAAATATGG 
CGCTTTAGAG AAGTGGTAGA TGATAATTCT GAGGATATTT GGGACCATGA TAAGATCAGC 
TTATCTGAAG CAAAGAAAAT AGAAGAAGAT TTTAATATTG GAGAAGAAGT ATCAGAAGAA 
ATTAGTGTAG ATAGTTTTGG AAGACGAGCT ATTACTGCTG CTAGACAAAC ACTTATCCAA 
AAAGTAAAAG ATTTGGAAAA GGATGCTTTA TACTTGAAAT ATACGCAACT TATTGGAGAA 
ATGATTACTG TGGAAGTACA TCAAATACTT CCTCAAGAAG TCATTTTAGT TGATGAAGAA 
AGAAAAGAGC TATTTTTGCC TAAATCAGAA CAGATATTTA AGGATATCTT TAAAAAAGGT 
GAATATATAA GAGCTGTAGT ACACCGAATA GACCTACAAA AAAGTACTCC TAAAGTTATT 
CTTTCTAGGA CCTCCCCTAT ATTCTTAGAA AGGCTGTTTG AAAGTGAAGT TCCAGAAATT 
TTTGATGGTA TCATAACTAT TAAAAAAGTA GTACGTGAGC CTGGAGAAAG AGCAAAAGTC 
GCTGTAGAAT CCCTAGATGA TAGAATAGAT CCTGTAGGCG CTTGTGTAGG CATCAAAGGT 
TCTAGAATAC ACAGTATTGT TAGAGAATTA CAAAATGAAA ATATTGATGT TATTAACTAT 
ACTGATAATT TAGAACTTTA TATCAGTCGT GCTTTAAGCC CTGCGAAGAT AAGTAGTATA 
CAAATGAAAG GAGATAGAGT AGCTGTGTAT CTAAAACCAG ACCAAGTCTC ATTAGCAATA 
GGAAAAGGGG GCCAAAATAT AAAACTGGCT AGTAGACTTG TGGATAGAGA AATAGACGTA 
TACAGAGAGG TTGATAGTAT TGGTGAAGAT GTAAATTTAG AAGAATTTGC TGATGAAATA 
GAGCCTTGGA TTATCGACGA ACTAAAAAAA ACAGGCCTTG ATAGTGCTAA AAGTGTTTTA 
GCAATACCTA AAGAAGATTT AGAGCGAAGA ACAGACCTAG AAAAAGAAAC TATTGATGAG 
CTTTATAGAG TATTAAAACA AGAATTTGAA GAATAA 

 

Protein sequence

MESKKLIETF AEFARSKNVD RPTVIRILEE VFKAMIHKKF GTDDNFDIII NLDQGDLQIW 
RFREVVDDNS EDIWDHDKIS LSEAKKIEED FNIGEEVSEE ISVDSFGRRA ITAARQTLIQ 
KVKDLEKDAL YLKYTQLIGE MITVEVHQIL PQEVILVDEE RKELFLPKSE QIFKDIFKKG 
EYIRAVVHRI DLQKSTPKVI LSRTSPIFLE RLFESEVPEI FDGIITIKKV VREPGERAKV 
AVESLDDRID PVGACVGIKG SRIHSIVREL QNENIDVINY TDNLELYISR ALSPAKISSI 
QMKGDRVAVY LKPDQVSLAI GKGGQNIKLA SRLVDREIDV YREVDSIGED VNLEEFADEI 
EPWIIDELKK TGLDSAKSVL AIPKEDLERR TDLEKETIDE LYRVLKQEFE E