| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0125 |
|---|
| Symbol | |
|---|
| ID | 6376591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 145298 |
|---|
| End bp | 147427 |
|---|
| Gene Length | 2130 bp |
|---|
| Protein Length | 709 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642681316 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_001957301 |
|---|
| Protein GI | 189501584 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAG ATCTAAAATT TTTAAGAAAT ATAGGCATCA TGGCCCACAT TGATGCCGGT
AAAACTACTA CTACCGAACG TATATTATAC TATACTGGCC TTACCCACAA AATAGGAGAA
GTACATGAAG GCGGTGCTGT TATGGATTGG ATGGAGCAAG AGCAGGAGCG AGGAATTACA
ATTACTGCCG CAGCTACTAC TACATTTTGG AAATATCCCA CTGTACAAGG GCAAGTTACC
AAGGATACAC AACAATATAG CATTAATATT ATTGATACGC CTGGCCACGT AGATTTTACA
GTAGAAGTGG AGCGCTCATT ACGTGTTTTA GATGGAGCCG TTGCACTTTT CTGTGCTGTA
TCCGGTGTAG AGCCTCAGTC AGAAACTGTT TGGCGACAAG CTGATAAGTA TAGAGTCCCT
AGAATATGCT TTGTCAATAA AATGGACCGG GCTGGCGCTG ATTTTTTTAA TGCAGTTTCA
GAAATAAAAA GTAAGCTGGG TGCTAATCCT ATTCCTTTAC AAATACCTAT AGGTAGTGAA
GATACCTTTA AAGGTGTTGT AGACCTAATC CGTAACCAAG CCATCATTTG GAATGATGAA
GATTTAGGTA TGACTTACCA GGTAGTACCT ATACCAGAAG ACCTAAAAGA AACAGTAGAG
GAGTATCGTC AAAAATTAAT GGAAAGTGTT GCTGAATATG ATGAAGTGTT ATTAGAAAAG
TATTTTAACG ATCCTAATAC CATTACAACA GAAGAAATAA TGGTAGCTAT ACGTAAGGCT
GTTATAGATA TGTCTATCAG CCCGGTATTA TGTGGAGCAT CCTTTAAAAA CAAAGGGGTA
CAAGCCTTAC TAGATGCTGT TTGTACTTAT TTGCCTTCTC CTTTAGACCT ACCTCCTGTA
CAAGGAACTA ATCCAGATAC AGAAGAAAAG CAAATAAGAA AGCCTGATGT AAACGAACCT
TTTGCAGCGT TAGCATTTAA AATTGCAACT GATCCTTTTG TAGGACGATT GGCTTTTATG
CGCGTTTATT CTGGTAAGCT AGATGGTAGC TCTTATGTCT ATAATAATAG AACAGGAAAA
AAAGAACGTA TATCTAGGCT AATGCAAATG CATGCCAATA AACAAAATCC TATAGATAGT
ATAGAAGCAG GTGATATATG CGCAGCTGTG GGATTCAAAG ATATCAGAAC CGGTGATACC
TTAACTGATG AAAAAAACAA AATTATACTT GAGAGTATTG TTTTCCCAGA ACCTGTGATT
GGCTATTCTA TTGAGCCTAA AAAGCAAGCA GATGTAGATA AACTTTCTAT GGCTATTTCA
AAGTTAGTAG AGGAGGACCC TACGTTGCAT GTTGAAACCA ACGAAGAGAC TGGGCAGACG
GTTATGAAAG GTATGGGTGA GCTACACTTA GAAATTATTA TTGATAGGCT CAGAAGAGAG
TTTAAATTAG AGATTAACCA AGGTGCACCA CAAGTAGCTT ATAAAGAAGC CCTTACTTCT
ACTATAGAGC ATAAAGAGGT TTATAAAAAG CAGACAGGTG GTAGAGGTAA ATTTGCTGAT
ATTGTGTTTG AATTAGGGCC TAGAGAAGAT GGTCAAATGG GGTTGCAGTT TACTAATGAA
ATTGTTGGAG GAGCTATCCC AAGAGAATTC ATACCAGCTA TACAAAAAGG GTTTGCCGCT
GCTATGGCTA ATGGCCCATT AGCAAGTTAC CCGGTAGAAT CTATGAAGGT AAAACTTATA
CATGGTTCGT TCCATGAAGT AGACTCTGAC TCGCTATCTT TTGAATTGGC AGCACGTATT
GGTTTTAAAG AAGCTGCTAA GAAAGCTAGT CCAGTAATTA TGGAGCCTAT CATGGCAGTA
GAAGTAACTA CGCCCGACGA GTTTACCGGT CCTGTAACTG GAGATTTAAA TAAACGTAGA
GGTATTATGC GTGGTATGGA TGCTAAAGGA AATACACAAG TTGTTAAAGC AGACGTACCT
TTGTCAGAGC TGTTTGGTTA TGTAACAGAT CTTCGTACAA TTACCTCTGG TCGTGCGGCA
GCTACATTGA CTTTTTCTCG TTATGAACAA GTCCCTAAGC AACTCGCAGA TAGTATTGTA
GAAAAAGTAA AAGGAACAGC AAATAAATAA
|
|---|
| Protein sequence | MAKDLKFLRN IGIMAHIDAG KTTTTERILY YTGLTHKIGE VHEGGAVMDW MEQEQERGIT
ITAAATTTFW KYPTVQGQVT KDTQQYSINI IDTPGHVDFT VEVERSLRVL DGAVALFCAV
SGVEPQSETV WRQADKYRVP RICFVNKMDR AGADFFNAVS EIKSKLGANP IPLQIPIGSE
DTFKGVVDLI RNQAIIWNDE DLGMTYQVVP IPEDLKETVE EYRQKLMESV AEYDEVLLEK
YFNDPNTITT EEIMVAIRKA VIDMSISPVL CGASFKNKGV QALLDAVCTY LPSPLDLPPV
QGTNPDTEEK QIRKPDVNEP FAALAFKIAT DPFVGRLAFM RVYSGKLDGS SYVYNNRTGK
KERISRLMQM HANKQNPIDS IEAGDICAAV GFKDIRTGDT LTDEKNKIIL ESIVFPEPVI
GYSIEPKKQA DVDKLSMAIS KLVEEDPTLH VETNEETGQT VMKGMGELHL EIIIDRLRRE
FKLEINQGAP QVAYKEALTS TIEHKEVYKK QTGGRGKFAD IVFELGPRED GQMGLQFTNE
IVGGAIPREF IPAIQKGFAA AMANGPLASY PVESMKVKLI HGSFHEVDSD SLSFELAARI
GFKEAAKKAS PVIMEPIMAV EVTTPDEFTG PVTGDLNKRR GIMRGMDAKG NTQVVKADVP
LSELFGYVTD LRTITSGRAA ATLTFSRYEQ VPKQLADSIV EKVKGTANK
|
|---|
| |