Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0048 |
Symbol | truA |
ID | 6376460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 66037 |
End bp | 66798 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642681244 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001957230 |
Protein GI | 189501513 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTATT TTTTGGAAAT AGCTTATCAA GGAACCCACT ATCATGGATG GCAAATACAG CAGAATGCCA CTTCCGTTCA AGCAGTTATT CAAAAAAAGC TAACGCAGCT ATTATCAACT AATATAGAAA TTGTAGGGAG TAGTAGGACC GATACTGGTG TGCATGCACA GCAACAATTT GCACACGTAG ATATGCCTTT TACAATAGAT ATTGATAAAT TAAAATATAA ACTTAATTTA ATAGTACCTT CTGATATTGC AATATTAGGA ATTCACCCAG TCTTACCAAC AGCTCATTCT CGTTTTGATG CACTCAGCAG AACATATGTG TATAAAATAT CTTGCACTAA AAATCCATTT ATGCAGGCAA CAACATATGT TTTTAGAAGG GTGTTAGATT TAGAGAAAAT GAACGAAGCA GCAGCTATAC TTAAAATATA TAAAAATTTT GAGAGTTTTA GTAAGGTAGG CTCTATTACG GACCATACGT TGTATCCTAA CCTTTGTAAT ATCATTGAAG CTCATTGGTC GACTGGTAGT AATGACCAAC TAATTTTCCA GATTACTGCT AATAGATTTC TTAGAGGTAT GGTGCGAGCT ATTGTAGGAA ACTTACTAGA AGTAGGCTTA GGGAAATGTA GTGTCAAAGA TTTTGAGTAT ACCCTAGTAC AAAAAGATCG TAACCTAGCA GCTAGTTTAG TACCTGCTTG TGGGTTAACT TTGGTTAATG TTACTTATCC CGATACTATA TTTACAGTAT AA
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Protein sequence | MRYFLEIAYQ GTHYHGWQIQ QNATSVQAVI QKKLTQLLST NIEIVGSSRT DTGVHAQQQF AHVDMPFTID IDKLKYKLNL IVPSDIAILG IHPVLPTAHS RFDALSRTYV YKISCTKNPF MQATTYVFRR VLDLEKMNEA AAILKIYKNF ESFSKVGSIT DHTLYPNLCN IIEAHWSTGS NDQLIFQITA NRFLRGMVRA IVGNLLEVGL GKCSVKDFEY TLVQKDRNLA ASLVPACGLT LVNVTYPDTI FTV
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