Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0034 |
Symbol | |
ID | 6376438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 44884 |
End bp | 47175 |
Gene Length | 2292 bp |
Protein Length | 763 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642681232 |
Product | Sel1 domain-containing protein |
Protein accession | YP_001957218 |
Protein GI | 189501501 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACAA TTATCACACT CAGTAACCAT AAAGGAAAAG GCGTAAAAAC GACCTTTGCT ATAAACCATT CAAAATTAAT ATTAAACAGC CTAATTTTTT GTGCGCTAGG ATTAAGTATA ATTTCCTGTT CCACGGGGTT AGTAAATACC AACCAGCAAA GTTTTCCCTT AATTATGCAT GTAAAGCCAG AAGGATTATT AGAGGCAGAA ACGACGATAG AAGCTCATTT CAGTCTAGCC AACAATGCTG AAATAGCGAA TTTAAAAGAT TGTCAATTAA AAGTTAGTAT CACACCCAAA GGGAATAGCC ATATCAAGTT GCTATATACT AATGCAGCAG GCAAACAAAA AAGTGTGCCA AATATTGCTA ACAACCTTAC TTTCTTTACA GATAAAACTG GGGTGGACAT AGAAGATGAG GTTTTAGTAA TACCTTTTAA GCTTATTCCA GCCGTAGGGG TAGATACAGT GCAAATTACA TTTGAACTTT TGGATTACGA AGGAAGACGC ATACAAACAT GTCATACAAC CTGGTATAAT AATCAATCTG CCGGCTTAGG AATGACATCA AGCAAGCAAG TAGATTCCTT AGAAATAGAG GAAAAAGAAG GCCAAGTATC CATCATAGCA GGAGAACAGG CATCAAGTAC CTTCATAACA GACCAACAAT TACAGTCAGT TAGTGATTAC CCTACACTTA CAGAAGAAAT AAGCAGCAAA GAAGAAGTAG TGGAAGGACA ACAGCAAGTA GCTCCTATTA CTATAAATTA TAATTCCACG CGTATCTTCA AGTTAGCTAA ACTTGCTAAT GCTAATAATA GAGAAGCTCA AGAAACCATT GTTGGAGGGT ATTTAAGAGT AGGTGTAAGA CCTTATCTAA AAGATTTTAT CAGTCCTTTT AATTGGGCAG GAATAAAAGA TAAGGCATTA GAAGATGAGC GATATGTTTA TCTTTTGTTA CGTTTTTTAG GGGAAGAAAA ACAGGGTTGT ATAGATACAG ATATTATTAG TAACATTCGC AGGCATGCAA AAATGGGGAA TGTCTTGGCC CAAAATAATT TAGGATATAT GTATAGGAAT GGAGTAGAAT TTCCCCTTGA CTATACAAAA GCAATCAAAT GGTATACCAG GGCAGCCAAA GCAGGCAATG TACTGGCACA AACTAATTTG GGTTATATGT ATGACAAAGG ATTAGGGGTA GCACCTAATT CCAAACAAGC GAATAAATGG TACAAGAGAG CAGCTAAACA AGGCTACGCG GCTGCACAAA CCAATTTAGG ACTCTCGTAT CAGAAAGAAT TAGGAGTAGC TCAAGACTAC AGGAAAGCTT TCAAGTGGTG TATGAAAGCA GCTGAACAGG CTTATGGAGA TGCACAAGCT AATTTAGGGA TTATATATCG CGATGGTTTG GGAATTGAGA AAAACTATGA ACAAGCGTTA ATGTGGTATA CCAGGGCAGC TAGCCTAGAA AATAGAGTTG CACAAGCTCA TTTAGCATGC ATGCATATGA GAGGTTGTGG AACACCTATA GACCATGATA AAGGCATTTA TTGGCTTATG AAAAGTGAAA ACCAAAAAAA TATGTTAGCC GCTCGTTCAT ACCTTCCTCA AGATTCTTCC ACCAATACAG CCTCTCAAGA AGAGCCAAAT GGAATAGGGG AAGAGCTCCT TAAAACATGG CAAGCAATGA TTATACAAAA AGAGCAAGGC CGTCCCCATA CCCATGCTAT CTTACCACTC GAAGCTTATC GACAGTTAGA AATAATAATG AATAAATTTA CCCATTGGGC ACATAAAATA AGTAGCAAAT CTGGCTTAAT GATTAGGTGC GATAATATTA AAGGACAGGA TATAGTGAGT ACCATTGAAA ATTACCAGAG ATTATCCGGC ACTACGCCCT TTGTAGAGTC ATATATAGTG CAAGGTAAAA CTTACATTAG TTTTGGCCAG GATAATGTCC AACTATCCAA AGAAATTGTA AACGAGTTAA TTCAGCGAAT GAACTACAAG CAGGCTAAAG GCATATTAAA ACAGCTTCAA TTAATTTATA AACAAGCCCA GGCAGAATCA GCCGGTAAAG CAAGTTATCT GGAAGAGCAA CTAAATTTCT TGCCATTAGT CGAAAAAAGA AATAAACTTT TAAAGAGACT AGAAGAAGCA AATAAAATAG GAGGGCTGTT TACTTTTAAA CTACAGGATA TAGAAGAAGA GGCTGATCAG TTTAAGGCTT ATTATAAGCT ACTAATGGAA GAAATTAAAA AAGGAGAAGA TAGACGTAAG TGGAAATTCT AG
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Protein sequence | MATIITLSNH KGKGVKTTFA INHSKLILNS LIFCALGLSI ISCSTGLVNT NQQSFPLIMH VKPEGLLEAE TTIEAHFSLA NNAEIANLKD CQLKVSITPK GNSHIKLLYT NAAGKQKSVP NIANNLTFFT DKTGVDIEDE VLVIPFKLIP AVGVDTVQIT FELLDYEGRR IQTCHTTWYN NQSAGLGMTS SKQVDSLEIE EKEGQVSIIA GEQASSTFIT DQQLQSVSDY PTLTEEISSK EEVVEGQQQV APITINYNST RIFKLAKLAN ANNREAQETI VGGYLRVGVR PYLKDFISPF NWAGIKDKAL EDERYVYLLL RFLGEEKQGC IDTDIISNIR RHAKMGNVLA QNNLGYMYRN GVEFPLDYTK AIKWYTRAAK AGNVLAQTNL GYMYDKGLGV APNSKQANKW YKRAAKQGYA AAQTNLGLSY QKELGVAQDY RKAFKWCMKA AEQAYGDAQA NLGIIYRDGL GIEKNYEQAL MWYTRAASLE NRVAQAHLAC MHMRGCGTPI DHDKGIYWLM KSENQKNMLA ARSYLPQDSS TNTASQEEPN GIGEELLKTW QAMIIQKEQG RPHTHAILPL EAYRQLEIIM NKFTHWAHKI SSKSGLMIRC DNIKGQDIVS TIENYQRLSG TTPFVESYIV QGKTYISFGQ DNVQLSKEIV NELIQRMNYK QAKGILKQLQ LIYKQAQAES AGKASYLEEQ LNFLPLVEKR NKLLKRLEEA NKIGGLFTFK LQDIEEEADQ FKAYYKLLME EIKKGEDRRK WKF
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