Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0024 |
Symbol | |
ID | 6376578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | + |
Start bp | 30465 |
End bp | 32255 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642681224 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001957210 |
Protein GI | 189501493 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCCA AGCAATATGA AATAACAGAA ATCGGAAAAT TACCTAACCA ACCTGGAGTT TATTTCTTTT ATAATAAACA GCAACAGATT ATCTATGTGG GCAAAGCAAA GGACCTAAAA AAGAGAGTTT CTAGCTACTT TAACAAAAAC CAACAGGATA ATTTAAAAAC TAGGAGAATG GTAGAGGAAA TAGCTGCTAT TAGTTTTACA ATAGTTAATT CTGAGTATGA AGCTTTGCTG CTAGAAAATA ACCTTATCAA GAGATTTCAA CCACGTTATA ATATTTTACT GAAAGATGAT AAAAGCTTCC CTTACATATG CATTACACGC GAGCGGTTTC CAAAAGTCAT TACTACCAGG CAACCAGGTG CTAAGCTAGG ACAATATTAT GGTCCATTCA CAGACCTTAA AAACATGTAT CAAATCCTAG ATCTCATTAA GAGTCTATAT ACCCTCCGCA CTTGCAACTA TAATTTATTA GAAGAAAACA TCTGTAAACA TAAATTTAAA GTTTGTTTAG AATATCATAT AGGACATTGT AAAGGACCTT GTGAAGGATT GCAAACCGAA GAAGCTTATA ACCAAGACAT TCAACAAATT GAGCATTTTC TTAAAGGCAA TATCAATGCT GTCAAAAAAC ATTTTAAAGA AAAGATGTCC CAAGCAGCAG CAGCAATGGA CTATAAGAAT GCACAAGCTT ACAAAGAGAA AATAGCAGCT TTAGAAAACT ACCAATCAAA ATCCTTGGTA GTCAATCCGC AAGTAGGAAA TCTAGATGTA TTTGCTATTG TATCTGATGC TAAAGCTGCT TTTATTAGCT ATTTACAAAT AAAAGAGGGA GCTATTATCT GTACACAAAA TACAGAGATT AAAAAGCAGC TAGAAGAACT AGATGAAGAT ATACTTCCTT TAATCATTTT ACATTTTAGA GAAAAGTATG CAAGTAATCC ATCAGAGATT TTAGTCAACA TACCTATTGC TACTACCTTT GACAAAGCAA TGCTCACTGT ACCTAGAATA GGAGATAAAA AGAAATTAGT AGAATTAGCT ACCAAAAATG TACTCTTTCT AAAAAGAGAA GCATTACTAC GCCAAGAAGA TAACCAAAAC CGTGCTAATA AGACGCTTGT ATTATTACAA CATGACTTAC AATTAAAAGA TTTACCCTTG CATATCGAAT GCTTTGATAA TTCTAATATA CAAGGCACAC ATCCCGTAGC AGCCATGGTT GTCTTCCAAC ATGGAAAGCC TGCAAAAAAA GAGTATCGGC ATTTTAATAT TAAAACTGTT GTGGGGCCTG ATGATTTTGC ATCCATGCGA GAAATAGTTA CTAGAAGGTA CAGAAGGTTG ATAGAGGAAA ATCAAAAACT TCCTGATCTC ATTGTTATTG ATGGTGGTAA AGGGCAGTTG GGTGCTGCAG TAGCAGCTTT GCAAGAATTG GGTATTTATG GACAGATACC AATTATAGGA ATAGCGAAAC GTCTGGAGGA AATCTACTTT CCAGAAGATA GTTACCCTAT TCACATAAGC AAACAATCCC CCTCTTTGAA ACTGCTACAG CAGATACGGA ACGAAGCACA TAGGTTTGCC ATTACTTTCC ATAGAGACAA GCGTAGTAAA ACCAGCCTTA AAAGCCAACT AGAGTCTATA CCGGGCGTAG GAGAAAAAAC AATCACCACA CTTTTACAAC ACTTTGGTTC TGTCCAAAAC ATTAAAGAAG CGAGTCTAAA GGCATTGGCA AGCCAGGTTG GTAATAAAAG GGCAATACAA ATTAAGGAAC ACTTGAAGTA G
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Protein sequence | MEAKQYEITE IGKLPNQPGV YFFYNKQQQI IYVGKAKDLK KRVSSYFNKN QQDNLKTRRM VEEIAAISFT IVNSEYEALL LENNLIKRFQ PRYNILLKDD KSFPYICITR ERFPKVITTR QPGAKLGQYY GPFTDLKNMY QILDLIKSLY TLRTCNYNLL EENICKHKFK VCLEYHIGHC KGPCEGLQTE EAYNQDIQQI EHFLKGNINA VKKHFKEKMS QAAAAMDYKN AQAYKEKIAA LENYQSKSLV VNPQVGNLDV FAIVSDAKAA FISYLQIKEG AIICTQNTEI KKQLEELDED ILPLIILHFR EKYASNPSEI LVNIPIATTF DKAMLTVPRI GDKKKLVELA TKNVLFLKRE ALLRQEDNQN RANKTLVLLQ HDLQLKDLPL HIECFDNSNI QGTHPVAAMV VFQHGKPAKK EYRHFNIKTV VGPDDFASMR EIVTRRYRRL IEENQKLPDL IVIDGGKGQL GAAVAALQEL GIYGQIPIIG IAKRLEEIYF PEDSYPIHIS KQSPSLKLLQ QIRNEAHRFA ITFHRDKRSK TSLKSQLESI PGVGEKTITT LLQHFGSVQN IKEASLKALA SQVGNKRAIQ IKEHLK
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