| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0014 |
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| Symbol | |
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| ID | 6377705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | + |
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| Start bp | 18265 |
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| End bp | 19128 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642681214 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001957200 |
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| Protein GI | 189501483 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACAGC TCAAAATAAG CAAGCAGATT ACCAACCGCG AAAGCCAATC TTTAGATAAA
TATCTACAAG AGATTGGACG AGTAGACCTG CTTACACCAG AAGAGGAAGT GGAACTTGCA
AAACGTATTA AGTCAGGCGA TAAAATTGCA TTGGAACAGC TTACTAAAGC TAACTTACGT
TTCGTAGTGT CTGTGGCTAA ACAATACCAG AACCAAGGCC TATCGTTGAG TGATCTTATT
AATGAGGGGA ACTTAGGACT TATTAAATCG GCTCAGCGTT TTGACGAAAC ACGAGGATTT
AAGTTTATTT CCTATGCCGT ATGGTGGATT AGACAGTCTA TCTTGCAAGC TTTAGCTGAG
CAGTCGCGTA TTGTACGTTT ACCACTCAAC AGAGTAGGTA CCCTTAACAA ATTATCTAGG
ACTTTCTCGC AGCTTGAACA AAAATATAAA CGCGAACCAA CTGCTGAAGA GCTGGCAGAA
GAACTAGAGG TTACGCCCGG CGAAATAAGT GATACCATGA AAATATCTGG TCGTCACGTA
TCAATGGATG CTCCTTTTGT ACAAGGTGAA GAGCATAGCT TACTAGACGT ATTAGAAGAT
GATGATGAAG ATAAACCTGA TGATACGCTT ATTGATGAAT CTTTGTGCAA AGATATAGAA
CGTGCTTTAT CCTTGCTTAC AGAAAGAGAA GCTGGTGTTA TAAGCTATTA CTTTGGTTTA
AAAGGTACAA ACCCAATGAC CCTAGAAGAA ATAGGTACTC GGTTTAACCT AACTCGTGAG
CGTGTGCGCC AGATTAAGGA AAAGGCAATC AAAAAATTAC GCCATGTAGC AAGCAGCAAA
ACTTTAAAAA ACTATCTAGG TTAA
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| Protein sequence | MRQLKISKQI TNRESQSLDK YLQEIGRVDL LTPEEEVELA KRIKSGDKIA LEQLTKANLR
FVVSVAKQYQ NQGLSLSDLI NEGNLGLIKS AQRFDETRGF KFISYAVWWI RQSILQALAE
QSRIVRLPLN RVGTLNKLSR TFSQLEQKYK REPTAEELAE ELEVTPGEIS DTMKISGRHV
SMDAPFVQGE EHSLLDVLED DDEDKPDDTL IDESLCKDIE RALSLLTERE AGVISYYFGL
KGTNPMTLEE IGTRFNLTRE RVRQIKEKAI KKLRHVASSK TLKNYLG
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