| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0005 |
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| Symbol | |
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| ID | 6377226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | + |
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| Start bp | 4719 |
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| End bp | 6125 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642681205 |
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| Product | TrmA family RNA methyltransferase |
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| Protein accession | YP_001957192 |
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| Protein GI | 189501475 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCCAA AATACAAACA ACAGATTATA AAAGATATAA TTATTGGCGA TTTAGCAGAA
GGAAACAGGT GTGTAGCACG CGTAGACAAC CAAGTTGTTT TTGTAGAACA AGCAGCACCT
GGCGATATCA TGGATATACA AATCATGAAA AAAAAGCGTG GCTATGCAGA AGCCATTCCT
GTACAACTAC ATAAGCCTGG CCCTAACCGT ATACAACCCT TTTGTATGCA TTTCGGTGTC
TGTGGTGGAT GCCAGTGGCA GCATATCGAC TACTCAGCTC AATTGGCTGC TAAAGAGCAG
CTTGTAAAAG AAAAGCTAAT TAGATTAGGG CGCATAGTCA ATCCTCCAGT GGCAAAGATA
TTGGCTGCCG ATCCTAATCA ATACTACAGA AATAAGCTAG AATATACTTT TTCCAATAAA
CGTTGGCTAA CACAGCAAGA AATACAAAGC GACCAGCCTT TAGATAGGTA TGCTTTGGGT
TTTCATAAGC CTGGCTACTT CGACAAAGTA GTAGATATTC AGCATTGTTA CTTACAAGCA
GAACCATCCA ATGCTATTAG ACTGGCTGTA GGCCAGTTTG CAAGAGAACA TGGTTACAGT
TTTTATGACT TTAGGAGTCA CCAGGGGCTA CTTAGAAATC TAATTGTCCG TACTACTTCT
ACGGGTGAAG TAATGGTTAT TGTACAGTTT GGAGAAAATC AGGAAGGCCC AATTGTGCAT
ATAATGGATT TCATACAAAA AAAGTTTCCT ACACTTACCT CTTTGCAGTA TATAGTTAAC
ACTAAATACA ATGAAACTTT TTACGACCTA GAAGTTCATT GCTATGCAGG CCAGCCTTTT
ATTACAGAAG TTATTGACGG ACTTCAATGG CAAATAGGGC CTAAATCCTT TTTTCAAACC
AATTCTACAC AAGCTAAAGT ACTTTATCAA ACAGTAGCAG ATTTAGCTAA TTTACAAGGA
CATGAGCTAG TATATGATTT ATATACAGGC GTAGGTACCA TTGCCCATTT TTTAGCACGA
AAGGCACGCC AGGTAGTTGG CATTGAAATG ATTGAAAGTG CTATCAAGGA TGCACAAATT
AATGCACAAC TTAATCAGCT TAGCAACGTA AGCTTCTGGT TAGGAGACAT GAAAGATATA
TTTAATGAAG AGTTACTTAA AGAATGTGGA AGGCCAGATA TCATCGTAAC AGACCCGCCT
AGAGCAGGGA TGCACCCAGA CGTTGTTCAA CAACTATTAC AGGTAGCACC AGAAAAGATT
ATTTATGTAA GCTGTAACCC TGCCACGCAA GCCAGGGACA TTCATGATTT GCAAGATAGA
TATGTACTTA CCCATGCACA ACCCATCGAC ATGTTTCCAC ATACGAGCCA TGTAGAAAAT
GTAGCTGTGC TAGTTAAGAC GACTTAG
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| Protein sequence | MAPKYKQQII KDIIIGDLAE GNRCVARVDN QVVFVEQAAP GDIMDIQIMK KKRGYAEAIP
VQLHKPGPNR IQPFCMHFGV CGGCQWQHID YSAQLAAKEQ LVKEKLIRLG RIVNPPVAKI
LAADPNQYYR NKLEYTFSNK RWLTQQEIQS DQPLDRYALG FHKPGYFDKV VDIQHCYLQA
EPSNAIRLAV GQFAREHGYS FYDFRSHQGL LRNLIVRTTS TGEVMVIVQF GENQEGPIVH
IMDFIQKKFP TLTSLQYIVN TKYNETFYDL EVHCYAGQPF ITEVIDGLQW QIGPKSFFQT
NSTQAKVLYQ TVADLANLQG HELVYDLYTG VGTIAHFLAR KARQVVGIEM IESAIKDAQI
NAQLNQLSNV SFWLGDMKDI FNEELLKECG RPDIIVTDPP RAGMHPDVVQ QLLQVAPEKI
IYVSCNPATQ ARDIHDLQDR YVLTHAQPID MFPHTSHVEN VAVLVKTT
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