Gene BLD_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1977 
Symbol 
ID6364439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp2360963 
End bp2363524 
Gene Length2562 bp 
Protein Length853 aa 
Translation table11 
GC content63% 
IMG OID642681186 
Producthypothetical protein 
Protein accessionYP_001955920 
Protein GI189440839 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACTG AACAGGATCA GTCCACTACG GAAGATCGCC CGAACAAGGC GACCTCCTCC 
ACTACCGACC GGCCGATCGC CTCTGGTGAC GGCCGGTCGG CCAGTTTTGC TGTCAGCGGA
CCGGACAGCC CGGCAACCGA CGACAGCAAC GATTCCGGAC CATACATCGA CGACATCGCT
CCGCGCCGCA CGCGCGACTT CGGCGACCTG ACCCGAGCCG GTCTGTCGCT ATTGATGGCC
GCCGTGGTCA TGGTGTTCGC CGTGTATCTG GGCGGCATGA CGCGCGGCGT CGAATCCGAC
GCGCATACCG CCGCCCAAGC CATCAACTGG CTGGCTGCTT TCCCCTCCAC CGTACTGACG
CAGCTGGCCA CCACGGTCAT CGTAGTTATC GTGCTCGCTC AGTTGCTCTT GGCCCGCGAA
TGGCTGCAAG CTGCGGTGTC CGCGCTGGCC ATGTTTGCCG GATACGGCAT TGTGTGGGTC
ATATCGACGG CAATCAGCAG TCTGAACGAT TTCACCCTGC CAATGGCACT GGTCTCAGCC
GCCACCTCAT ACGGCTCCGG GCTGTTGCCC GACATCTACG CCGGCATGGC GTCCTTCCTG
ACCGCCGCCG GGCCACGCCG TACCCGCTCC ACGGTCAAAT GGAGTTGGAA TATCCTGTAT
GCCATCGCCG CGGTGATGGT GGTGCTTTCG TGGCATTCGG TTACCGGCAT GCTGGTTTCG
ATGGCCGCCG GTCGCACGGT GGGCATGCTG ATCCGATTCG TGGTCGGCAC GCAGAACAAG
GGCGTGTGGG GCCAAGATCT GGTCGCCGCC CTGAAAGGCA TCGGACTGGA CACCGCCTCG
CTGATTCGGC ATCAGGAGCC CGGCGTCGGC CACGGTTCAC TGGCCGTCAC GCTGGACGAC
GATCTGGCCG AAGGCTCGCG CATCTACGAT CTGGATACCA CGGACAACCG TCGTTTCATC
GTTTCCGTCA TCGACGCGCA GACCCATACC GTCGGCTATC TGAAGCAGTT GTGGGACTGG
GTGCGTTTCA CCAGTGTGTC CATCCGACGT GACCGTTCCG TGCGTGACGC CGTCCAGCAT
CATTTCGCCA TGCTGCTGGG TCTGCACAAT ATCAAACTGC CCGCGCCCGC ACCCTACGGC
ATCGCCGATA CCGACGAATC CGCGATTCTG GTGCTGGATG CACACACCAT CGAACTGCCC
GCCAACCTGA ACACGCTTAC CAAGGCGGAT GCCGTGGCCT ACATGCGCTA CCTGTCCGTG
GCGAGCCGGC GCGGCTATAC GCACCGGCGC ATCACGCCGG ACACACTCGC CCGGCTTGAA
GACGGCACCG CCGTGATTGC CGGCTGGCTC AACGGCGACA ACGCTTCCGG CCCGGCCAAC
ACCGCGCTCG ACAAAGTTCA GCTGCTAGTG CTGTTCGCCG CGCTGATCGG CGTGGAACCG
GCGGTGGAGG CCGCCCGCGA GGCGTGGGGA GACACGACTC TGACGGCCTT GGCCCCGTTC
ATTCAGAAGG TCGCGGTCCC CTCCCCCACG CGCGCGCTGG AATCCTGGGA CAAGCAGCTG
CTCAAGGGCC TGAGGAGTCG TATCACCGCG CTGGCTGACG AGGAGACGGT GGAATCCGCC
GAACCGGTGA CGCTGGCCCG ATTCTCCTGG CGTTCGATGA TCACCATGCT GCTGGTCATC
GTGGCCGTGG TCGTGGTCTT CACCCAACTG AAGCCCGAGG AGATCATCAC CGCGCTGACC
AACGCCAACC CGTTGATGGC GGTGGTGACG CTCGCGTTCG GTGTCTGCGG CTGGATCGGC
TCGTCGATTT CGCTCGGTTC CCTGATGGCG CGGCACAAGC GTGACAATAT GGGCGTCTTC
ATGAGCCAGG TGGCAGGCGG CTTCGCCACC GTATCCATGC CTGCCGGCGT GGGCCCCTCG
TTCGTCAACC TGCAGTTCCT GCGCAAATCC GGCTATCGCA ACACCCCGGC CACCGCAATC
ATGAGCGCCG CGCTCGTGGT GTATTACGCC GTGTACTTCT CCATGCTGGT CATCATCGGC
CTGTTCACCG GCCGCAACAT GTTCTCCGGC GCAATCCCGA CAAACACGTT GGTTATCGTG
CTGGGCGTGG TGGTTGTGGT GCTGTCCATT GCGATGATGA TTCCGCCGTT GCGCCACTGG
GTGACCCGTC GTCTTATGCC GCTGGCCAAG ACGTATATCA ACCAGCTGCT GGACGTGCTT
TCCCAGCCCC GACAGCTCAC AGTCAGTTGC CTGGGCGCGC TGTTCCAGAA CGCGACCACT
GGGCTCGCTT TCTGGGCGGC CCTGCAAGCG TTCGGCCATT CATCGAATCC GATTGAAACG
ACGTTCGTCT TCCTGCTGGC CTATGCATTG GGTTCCGCAG TGCCCACTCC AGGCGGTCTG
GGCGGTGTGG AAGCGGCGCT GACATTCGCG TTCGTGGCGG TCGGAGTGCC GCAGGGCGTG
GCGCTTTCCG CCACTTTGCT GCACCGCGTG GTGTTCTACT GGCTGCGTAT TCCGCTGGGC
GCGGCGGCCA TGAAGTGGCT TGACAAGCAT AATCTTGTCT GA
 
Protein sequence
MTTEQDQSTT EDRPNKATSS TTDRPIASGD GRSASFAVSG PDSPATDDSN DSGPYIDDIA 
PRRTRDFGDL TRAGLSLLMA AVVMVFAVYL GGMTRGVESD AHTAAQAINW LAAFPSTVLT
QLATTVIVVI VLAQLLLARE WLQAAVSALA MFAGYGIVWV ISTAISSLND FTLPMALVSA
ATSYGSGLLP DIYAGMASFL TAAGPRRTRS TVKWSWNILY AIAAVMVVLS WHSVTGMLVS
MAAGRTVGML IRFVVGTQNK GVWGQDLVAA LKGIGLDTAS LIRHQEPGVG HGSLAVTLDD
DLAEGSRIYD LDTTDNRRFI VSVIDAQTHT VGYLKQLWDW VRFTSVSIRR DRSVRDAVQH
HFAMLLGLHN IKLPAPAPYG IADTDESAIL VLDAHTIELP ANLNTLTKAD AVAYMRYLSV
ASRRGYTHRR ITPDTLARLE DGTAVIAGWL NGDNASGPAN TALDKVQLLV LFAALIGVEP
AVEAAREAWG DTTLTALAPF IQKVAVPSPT RALESWDKQL LKGLRSRITA LADEETVESA
EPVTLARFSW RSMITMLLVI VAVVVVFTQL KPEEIITALT NANPLMAVVT LAFGVCGWIG
SSISLGSLMA RHKRDNMGVF MSQVAGGFAT VSMPAGVGPS FVNLQFLRKS GYRNTPATAI
MSAALVVYYA VYFSMLVIIG LFTGRNMFSG AIPTNTLVIV LGVVVVVLSI AMMIPPLRHW
VTRRLMPLAK TYINQLLDVL SQPRQLTVSC LGALFQNATT GLAFWAALQA FGHSSNPIET
TFVFLLAYAL GSAVPTPGGL GGVEAALTFA FVAVGVPQGV ALSATLLHRV VFYWLRIPLG
AAAMKWLDKH NLV