Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1977 |
Symbol | |
ID | 6364439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 2360963 |
End bp | 2363524 |
Gene Length | 2562 bp |
Protein Length | 853 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642681186 |
Product | hypothetical protein |
Protein accession | YP_001955920 |
Protein GI | 189440839 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein |
TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACTG AACAGGATCA GTCCACTACG GAAGATCGCC CGAACAAGGC GACCTCCTCC ACTACCGACC GGCCGATCGC CTCTGGTGAC GGCCGGTCGG CCAGTTTTGC TGTCAGCGGA CCGGACAGCC CGGCAACCGA CGACAGCAAC GATTCCGGAC CATACATCGA CGACATCGCT CCGCGCCGCA CGCGCGACTT CGGCGACCTG ACCCGAGCCG GTCTGTCGCT ATTGATGGCC GCCGTGGTCA TGGTGTTCGC CGTGTATCTG GGCGGCATGA CGCGCGGCGT CGAATCCGAC GCGCATACCG CCGCCCAAGC CATCAACTGG CTGGCTGCTT TCCCCTCCAC CGTACTGACG CAGCTGGCCA CCACGGTCAT CGTAGTTATC GTGCTCGCTC AGTTGCTCTT GGCCCGCGAA TGGCTGCAAG CTGCGGTGTC CGCGCTGGCC ATGTTTGCCG GATACGGCAT TGTGTGGGTC ATATCGACGG CAATCAGCAG TCTGAACGAT TTCACCCTGC CAATGGCACT GGTCTCAGCC GCCACCTCAT ACGGCTCCGG GCTGTTGCCC GACATCTACG CCGGCATGGC GTCCTTCCTG ACCGCCGCCG GGCCACGCCG TACCCGCTCC ACGGTCAAAT GGAGTTGGAA TATCCTGTAT GCCATCGCCG CGGTGATGGT GGTGCTTTCG TGGCATTCGG TTACCGGCAT GCTGGTTTCG ATGGCCGCCG GTCGCACGGT GGGCATGCTG ATCCGATTCG TGGTCGGCAC GCAGAACAAG GGCGTGTGGG GCCAAGATCT GGTCGCCGCC CTGAAAGGCA TCGGACTGGA CACCGCCTCG CTGATTCGGC ATCAGGAGCC CGGCGTCGGC CACGGTTCAC TGGCCGTCAC GCTGGACGAC GATCTGGCCG AAGGCTCGCG CATCTACGAT CTGGATACCA CGGACAACCG TCGTTTCATC GTTTCCGTCA TCGACGCGCA GACCCATACC GTCGGCTATC TGAAGCAGTT GTGGGACTGG GTGCGTTTCA CCAGTGTGTC CATCCGACGT GACCGTTCCG TGCGTGACGC CGTCCAGCAT CATTTCGCCA TGCTGCTGGG TCTGCACAAT ATCAAACTGC CCGCGCCCGC ACCCTACGGC ATCGCCGATA CCGACGAATC CGCGATTCTG GTGCTGGATG CACACACCAT CGAACTGCCC GCCAACCTGA ACACGCTTAC CAAGGCGGAT GCCGTGGCCT ACATGCGCTA CCTGTCCGTG GCGAGCCGGC GCGGCTATAC GCACCGGCGC ATCACGCCGG ACACACTCGC CCGGCTTGAA GACGGCACCG CCGTGATTGC CGGCTGGCTC AACGGCGACA ACGCTTCCGG CCCGGCCAAC ACCGCGCTCG ACAAAGTTCA GCTGCTAGTG CTGTTCGCCG CGCTGATCGG CGTGGAACCG GCGGTGGAGG CCGCCCGCGA GGCGTGGGGA GACACGACTC TGACGGCCTT GGCCCCGTTC ATTCAGAAGG TCGCGGTCCC CTCCCCCACG CGCGCGCTGG AATCCTGGGA CAAGCAGCTG CTCAAGGGCC TGAGGAGTCG TATCACCGCG CTGGCTGACG AGGAGACGGT GGAATCCGCC GAACCGGTGA CGCTGGCCCG ATTCTCCTGG CGTTCGATGA TCACCATGCT GCTGGTCATC GTGGCCGTGG TCGTGGTCTT CACCCAACTG AAGCCCGAGG AGATCATCAC CGCGCTGACC AACGCCAACC CGTTGATGGC GGTGGTGACG CTCGCGTTCG GTGTCTGCGG CTGGATCGGC TCGTCGATTT CGCTCGGTTC CCTGATGGCG CGGCACAAGC GTGACAATAT GGGCGTCTTC ATGAGCCAGG TGGCAGGCGG CTTCGCCACC GTATCCATGC CTGCCGGCGT GGGCCCCTCG TTCGTCAACC TGCAGTTCCT GCGCAAATCC GGCTATCGCA ACACCCCGGC CACCGCAATC ATGAGCGCCG CGCTCGTGGT GTATTACGCC GTGTACTTCT CCATGCTGGT CATCATCGGC CTGTTCACCG GCCGCAACAT GTTCTCCGGC GCAATCCCGA CAAACACGTT GGTTATCGTG CTGGGCGTGG TGGTTGTGGT GCTGTCCATT GCGATGATGA TTCCGCCGTT GCGCCACTGG GTGACCCGTC GTCTTATGCC GCTGGCCAAG ACGTATATCA ACCAGCTGCT GGACGTGCTT TCCCAGCCCC GACAGCTCAC AGTCAGTTGC CTGGGCGCGC TGTTCCAGAA CGCGACCACT GGGCTCGCTT TCTGGGCGGC CCTGCAAGCG TTCGGCCATT CATCGAATCC GATTGAAACG ACGTTCGTCT TCCTGCTGGC CTATGCATTG GGTTCCGCAG TGCCCACTCC AGGCGGTCTG GGCGGTGTGG AAGCGGCGCT GACATTCGCG TTCGTGGCGG TCGGAGTGCC GCAGGGCGTG GCGCTTTCCG CCACTTTGCT GCACCGCGTG GTGTTCTACT GGCTGCGTAT TCCGCTGGGC GCGGCGGCCA TGAAGTGGCT TGACAAGCAT AATCTTGTCT GA
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Protein sequence | MTTEQDQSTT EDRPNKATSS TTDRPIASGD GRSASFAVSG PDSPATDDSN DSGPYIDDIA PRRTRDFGDL TRAGLSLLMA AVVMVFAVYL GGMTRGVESD AHTAAQAINW LAAFPSTVLT QLATTVIVVI VLAQLLLARE WLQAAVSALA MFAGYGIVWV ISTAISSLND FTLPMALVSA ATSYGSGLLP DIYAGMASFL TAAGPRRTRS TVKWSWNILY AIAAVMVVLS WHSVTGMLVS MAAGRTVGML IRFVVGTQNK GVWGQDLVAA LKGIGLDTAS LIRHQEPGVG HGSLAVTLDD DLAEGSRIYD LDTTDNRRFI VSVIDAQTHT VGYLKQLWDW VRFTSVSIRR DRSVRDAVQH HFAMLLGLHN IKLPAPAPYG IADTDESAIL VLDAHTIELP ANLNTLTKAD AVAYMRYLSV ASRRGYTHRR ITPDTLARLE DGTAVIAGWL NGDNASGPAN TALDKVQLLV LFAALIGVEP AVEAAREAWG DTTLTALAPF IQKVAVPSPT RALESWDKQL LKGLRSRITA LADEETVESA EPVTLARFSW RSMITMLLVI VAVVVVFTQL KPEEIITALT NANPLMAVVT LAFGVCGWIG SSISLGSLMA RHKRDNMGVF MSQVAGGFAT VSMPAGVGPS FVNLQFLRKS GYRNTPATAI MSAALVVYYA VYFSMLVIIG LFTGRNMFSG AIPTNTLVIV LGVVVVVLSI AMMIPPLRHW VTRRLMPLAK TYINQLLDVL SQPRQLTVSC LGALFQNATT GLAFWAALQA FGHSSNPIET TFVFLLAYAL GSAVPTPGGL GGVEAALTFA FVAVGVPQGV ALSATLLHRV VFYWLRIPLG AAAMKWLDKH NLV
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