| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1971 |
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| Symbol | rpt1 |
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| ID | 6363720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2354498 |
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| End bp | 2356063 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642681180 |
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| Product | ATP-dependent 26S proteasome regulatory subunit |
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| Protein accession | YP_001955914 |
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| Protein GI | 189440833 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA CCGAAGATCT CGCCGCGCTG AACGATCGCC TGATGGCCAA GAACCATGCG
CTCGCCGAAG CGCTGAGCCG CGCCGGCAAG GAACTGACCA AGGCGAAGTC ACAGCTCGCC
CAGCTCGCTC AGCCGCCGCT CACCTTCGCT ACCATGGTCA AGGTCGATTC CACCCGCACC
GATGAAGACG GCATCCAGCA CGCGTCGGCC GAAGTCATTT CCGGCACCCG CCGCATGGTG
GTGCCTGTGG CCTCCAACGT CAACGCCGCC CGCCTGACCG CCGGGGCCAC CGTGATGCTC
AACGAGAAGC TCGTGCTGGT CGAGCAGCGC GATGCTGACA CCGTGGGCCA GATTCGCAGT
GTCAAGCAGG TACTTGACGA CGGTCGACTG ATCGTTACCG ACGCCTCCGG CAATCCCGTG
CTCATCCGCC GTTCCGGCGC GCTCGCGTAT GCGGGCATCA ATCAGGGCGA CCGTATTATC
ATCGATCCGT CCGTCCGCCT CGCCATCGAA GCGCTGCCCG CCGAGGGCGA CAAGGATCTG
GTGCTGGAGG AGACCCCGGA TGTCACGTTC GCCGACATCG GCGGCCTGGA TAGTGAGATC
GGTCGTATCA GGGACGCCGT CCAACTGCCG TTCCAGCATC GTGCGCTGTT TGAGCGCTAC
GATTTGAAGC CGCCAAAGGG CGTGCTGCTG TACGGTCCGC CCGGCAACGG CAAGACGATG
ATTGCCAAGG CCGTGGCGAA CGCCCTATGC GAGGGTGGTT ACGATTCGAA TGGCGACGGC
GCAATCAGTC CGGCCGAAAC CCATGTCAAG GGCGTGTTCC TGTCCGTCAA GGGCCCGGAA
CTGCTCAACA AATACGTCGG TGAATCCGAA CGACTGATTC GCCTGATTTT CCAGCGCGCC
CGTGAACGCG CCGCGGACGG CAATCCGGTG GTCGTGTTCA TCGATGAGAT GGATTCGCTG
CTACGCACCC GCGGCTCCGG CGTCTCCTCC GATGTGGAGA CCACGATCGT GCCCCAGTTC
CTCTCCGAAC TCGACGGCGT GGAATCACTC GACAATGTGA TGGTAATCGG TGCCTCCAAC
CGCGTGGACA TGATCGATCC GGCTGTGTTG CGACCGGGGC GTCTCGACGT CAAGATTCGC
GTCGGCCGGC CCAAAACCAA TCAGGCCATC GCCATCGTGG ACCATTACCT CACCGACGAC
CTGCCTCTGG AAGATGGCGT CGACGCGCAC GCCTTGTCCG CCGTGCTGGT GCATGACATC
TACGGAACCT CCGAACGCCG CCATCTATGC GACGTGCAGG AGGAGAACGG CCAGTGGCAT
GCGTTGTTCC TGGCCGACGT GGTCTCCGGC GCGATGCTCA AGAACATCGT GGACCGGGCC
AAGACCCGAG CGGTCAAGGA ATCCATCGAA ACCGGCTTGG ACGTGGCACT CACCGTGCCG
CTGCTCGCTG CCGCCGTGGA AGACGAATAC CGCGAGACCC GCGATTCCAT GGCCGACGTG
GACCCCGAAC AATGGTCGCG CATCAACGGC ATGGACCCGA TCCGCCGCAT CCGCACCGCC
GAATAG
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| Protein sequence | MSDTEDLAAL NDRLMAKNHA LAEALSRAGK ELTKAKSQLA QLAQPPLTFA TMVKVDSTRT
DEDGIQHASA EVISGTRRMV VPVASNVNAA RLTAGATVML NEKLVLVEQR DADTVGQIRS
VKQVLDDGRL IVTDASGNPV LIRRSGALAY AGINQGDRII IDPSVRLAIE ALPAEGDKDL
VLEETPDVTF ADIGGLDSEI GRIRDAVQLP FQHRALFERY DLKPPKGVLL YGPPGNGKTM
IAKAVANALC EGGYDSNGDG AISPAETHVK GVFLSVKGPE LLNKYVGESE RLIRLIFQRA
RERAADGNPV VVFIDEMDSL LRTRGSGVSS DVETTIVPQF LSELDGVESL DNVMVIGASN
RVDMIDPAVL RPGRLDVKIR VGRPKTNQAI AIVDHYLTDD LPLEDGVDAH ALSAVLVHDI
YGTSERRHLC DVQEENGQWH ALFLADVVSG AMLKNIVDRA KTRAVKESIE TGLDVALTVP
LLAAAVEDEY RETRDSMADV DPEQWSRING MDPIRRIRTA E
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