| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1959 |
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| Symbol | hsdM |
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| ID | 6363794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2336182 |
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| End bp | 2338749 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642681168 |
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| Product | type I restriction-modification system methyltransferase subunit |
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| Protein accession | YP_001955902 |
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| Protein GI | 189440821 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGC AGCAGCTTGC CGCCAAAATC TGGGAATCCG CCAACAAGAT GCGTTCCAAG
ATCGAGGCGA ATGAATACAA AGACTATATC CTGGGCTTTA TCTTCTATAA GTTCCTTTCA
GAGACGGAAA TTGCGCGTCT TCGTGCTGAA GACTGGGGAG ATGAAGATCT CAAGGGCTTG
GATGAGAATG ATGCCGAGAC CGTGCAGTAC GTACGTGATC TGTGCGGCTA CTTTATCTCC
TACGACAACC TGTTCTCCAC ATGGATTGCC AGCCAAAGCG ATTTCACCAT CGCCGACGTA
CGTGATGCGC TTTCCGCTTT TGAACGCAAC ATCGATCCAG CCCGCAAGCG TGTGTTCGCC
GGCATCTTCG ACACGTTGCA GACTGGTCTA TCCAAACTCG GTACCGATGA GAAAAGCCGT
AGCAAGGCCG CTCGCGACCT CATCTACCTC ATCAAGGACA TTCCGATGGA CAGCCGGCAG
GATTACGATA CCCTCGGCTT CATTTACGAA TATCTGATTA GCAACTTCGC TTCCAATGCG
GGTAAGAAGG CCGGTGAGTT CTACACGCCG AGCGAAGTTT CTCAGCTCAT GAGCGAAATA
GTGGCCTGGC ATCTTGCTGG TCGTGAAGAA ATCAACATTT ATGACCCCAC AAGTGGCTCA
GGCTCGTTGT TGATTCATAT TGGTCAAGCT GTGGCCCGCC GCAATGGCAA TCCGAATGAC
ATCAAATATT ATGCGCAGGA ACTCAAGGAG AATACCTACA ACCTCACACG CATGAACCTC
GTCATGCGCG GTATACTGCC GGACAATATC GTGACCCGCA ACGGTGACAC ATTAAAGAGC
GACTGGCCGT GGTTCGATAC CGACGAGACC AAGGACGAAA CCTATGAGCC GCTGTTTGTA
GATGCCGTGG TTTCGAATCC TCCTTACTCC CAGAACTGGG AGCCGCCGGA ACCGGGTGAA
GATATCCGCT TCGAATATGG CATCGCTCCC AAGTCCAAGG CTGATTATGC CTTCTTGCTG
CACGATCTCT ACCATCTGCG CGACGACGGC ATTATGACCA TCGTGTTGCC GCACGGCGTG
CTGTTCCGTG GTGGTGAAGA GGGCACTATT CGCCGGAATC TAGTGGAGAA CCACCATATT
CAGGCCATCA TCGGACTGCC AGCGAACATC TTCTTTGGCA CGGGCATTCC CACTATCGTG
ATGGTGCTGC GCAAGCACCG CAACGATGAC CATGTGCTTG TTGTGGATGC CTCCAAGTAT
TTCGCTAAGG ACGGTAAGAA CAACAAGCTG CGTGCGAGCG ATATCAAACG CATCGTGGAT
ACGGTGTCGG AGAATCGTGA TATCGATAAG TTCAGTCGTT TGGTCAGCCT TGACGAGATT
CGGCAGAACG ATTACAACCT CAACATTCCT CGATATGTGG ATTCCTCCGA AACCGCCGAA
AGTTGGGACG TGTATTCCAC TATGTTTGGC GGTATCCCCA AGCAGGACAT CGATGCGCTC
AACAAGTATT GGAATGTGTT TCCGGGATTG CGCCAACGTC TCTTCGCGGA GGAGAATGGT
CATTCGGCTA AGCTCGCTGT GCAAGATGTT CGTGAGGCGG TGAATGCTGA TTCTGGTGTG
AGTGCCTATA TCCAGCGTTA TCGTGAGGTT TTCACCGATT ATCCCTCATA TCTACGTGGC
GAACTGGTCG GTAATGCCGT CAACGTGAGC ATTGCCGCCG AGGAGGAAGT TCTGGCAAAT
GACCTGCTGC ATCGTTTGGC CGACGTACCA CTCGTAGATG CCTATACGGC ATATCAGGTG
CTTGATGACA GCTGGCAGAA GACCATCGCC AACGACCTTG AAACCATACA GAGCGAAGGC
CATGACGCCG TTCGCAAGGT TGACGCCAAC ATGGTCGTCA AAAAGAAAAG CGGCAAGGAT
GTCGAAGTGC AGGACGGCTG GGCCGGACAT ATTCTGCCGT TCGACCTTGT ACAAGAAAAA
CTGCTGAGTG CTGACCTTGC AGAAATCGGC ACATATGAAT CCCGATTGAC TGAGATTAGC
AGCGAAATCG CTGACATTCT TGAAAAACTG GATGAAGACG ACAAGAATTC GACCGATGCT
GTCAGCGAGG ATGGAGATTC TTTCGTTGCC ACTGAGTTGA AGAAAGCGGT GAAATCGATT
GGGAGGGATC CTGAGACTGA TTTTGACCGT GCCCTTGTGA ATGCGCAACG GTTGTTTGAT
GAGGAGCGTG AAGTCAAAAA GAACGTTAAG AATCTCCGCT CAGCGCTTGA TGAAAAGACC
CGGGCCGTTA TTGAAGGATT AAGCGATGAG CAAGCTGATG ACTTGCTCGC TGCCAAGTGG
GTGGAACCAT TGCAGCACAA ACTTGAGGAG CTTCCTCAGA CGGCTGTTGA TGAGTTGATT
GCATCGGTGA ATGCGTTGAA CGATAAGTAC TCGACTACCT ACTCCGATGT ATGCGAGCAA
ATCGAGCAGG CTGAGGCAGA ACTTGGCAAT ATGCTTGGTC AGCTGACCGG AAATGAGTTC
GACATGGCCG GTATTGCTGA GCTGAAGACC CTGTTGGGAG GCGAATGA
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| Protein sequence | MNKQQLAAKI WESANKMRSK IEANEYKDYI LGFIFYKFLS ETEIARLRAE DWGDEDLKGL
DENDAETVQY VRDLCGYFIS YDNLFSTWIA SQSDFTIADV RDALSAFERN IDPARKRVFA
GIFDTLQTGL SKLGTDEKSR SKAARDLIYL IKDIPMDSRQ DYDTLGFIYE YLISNFASNA
GKKAGEFYTP SEVSQLMSEI VAWHLAGREE INIYDPTSGS GSLLIHIGQA VARRNGNPND
IKYYAQELKE NTYNLTRMNL VMRGILPDNI VTRNGDTLKS DWPWFDTDET KDETYEPLFV
DAVVSNPPYS QNWEPPEPGE DIRFEYGIAP KSKADYAFLL HDLYHLRDDG IMTIVLPHGV
LFRGGEEGTI RRNLVENHHI QAIIGLPANI FFGTGIPTIV MVLRKHRNDD HVLVVDASKY
FAKDGKNNKL RASDIKRIVD TVSENRDIDK FSRLVSLDEI RQNDYNLNIP RYVDSSETAE
SWDVYSTMFG GIPKQDIDAL NKYWNVFPGL RQRLFAEENG HSAKLAVQDV REAVNADSGV
SAYIQRYREV FTDYPSYLRG ELVGNAVNVS IAAEEEVLAN DLLHRLADVP LVDAYTAYQV
LDDSWQKTIA NDLETIQSEG HDAVRKVDAN MVVKKKSGKD VEVQDGWAGH ILPFDLVQEK
LLSADLAEIG TYESRLTEIS SEIADILEKL DEDDKNSTDA VSEDGDSFVA TELKKAVKSI
GRDPETDFDR ALVNAQRLFD EEREVKKNVK NLRSALDEKT RAVIEGLSDE QADDLLAAKW
VEPLQHKLEE LPQTAVDELI ASVNALNDKY STTYSDVCEQ IEQAEAELGN MLGQLTGNEF
DMAGIAELKT LLGGE
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