| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1956 |
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| Symbol | xerC6 |
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| ID | 6363791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 2333695 |
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| End bp | 2334633 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642681165 |
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| Product | Integrase |
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| Protein accession | YP_001955899 |
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| Protein GI | 189440818 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGTCATAA ACACAATAAA CGAAGAAATG TCATTCTGCG ATTACTACTC GCAATGGGTC
GACGTCTACA AGGAAGGCGC GATTCGGGAG GTGACGATGA AGAAATACAA ACTCACACAG
GCGTGGCTGA GAAAGCTTAT CCCTGATCTT AAGCTTTCTG AGTTCGATCG TGTGAGTTAT
CAGAAACTCA TCAATGGATA CGCCGAACAT CATGAACATC AAACAACGAT GGATTTTCAT
CACCAACTGA AAGGGGCCAT TCTTGATGCT GTTGATGAGG GCCTAATTCA AAGAGATCCC
ACTCGAAAAG CAATCATCAA AGGGAAGCAG CCGAGACAAA AGAAGACGAA ATATCTTAAC
CAATTCGAAC TTCATGCTGT CCTTGCTGAC TTGAAGCTTG ACCCGATACC TAACTGGGAC
TGGCTGATAT TGCTGGTGGC AAAAACCGGT TTACGTTTCT CCGAAGCATT GGGTCTTACT
CCTGATGACT TTGATTTCGT CCACCAGACT TTGTCTGTCA ATAAGACTTG GAATTACAAG
AACGGAGGTG GCTTTGTTCC AACAAAAAAT GCTTCTTCGG TGCGTAAAGT ACAACTTGAT
TGGCAACTCA TCATGCAATT GTCCGTCCTG CTGAAGAACT TGCCTGACGA CAAGCCTATC
TTCGTGAACG GTAAGGTGTA CAACTCGACC GCAAACGGTA TTCTGGCCCG GCATTGCAAA
CAAGCCGGAG TACCCGTGAT CTCGATTCAC GGCTTGAGAC ATACCCATGC CTCATTGCTG
CTGTTTGCTG GCGTTTCAAT TGCGAGCGTG TCCAAGAGAC TGGGGCATGC AAGCATGAAC
ACAACGCAGG AAACATATCT GCATGTCATC CGTGAATTGG AGAACAAAGA CGTTGACATC
GTGATGGATA ACGCCCGAGA TTTTGCGCAA ATTGGTTGA
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| Protein sequence | MVINTINEEM SFCDYYSQWV DVYKEGAIRE VTMKKYKLTQ AWLRKLIPDL KLSEFDRVSY
QKLINGYAEH HEHQTTMDFH HQLKGAILDA VDEGLIQRDP TRKAIIKGKQ PRQKKTKYLN
QFELHAVLAD LKLDPIPNWD WLILLVAKTG LRFSEALGLT PDDFDFVHQT LSVNKTWNYK
NGGGFVPTKN ASSVRKVQLD WQLIMQLSVL LKNLPDDKPI FVNGKVYNST ANGILARHCK
QAGVPVISIH GLRHTHASLL LFAGVSIASV SKRLGHASMN TTQETYLHVI RELENKDVDI
VMDNARDFAQ IG
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