Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1948 |
Symbol | mdlB7 |
ID | 6364237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 2322261 |
End bp | 2324276 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642681157 |
Product | multidrug ABC transporter ATPase/permease |
Protein accession | YP_001955891 |
Protein GI | 189440810 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.720417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAACG ACCAGAGTTT CAAGAACCGC AAGCCTGCCA TGGGCAAAGC CGAGCCTGGC ACCATCAAGC GCATCTTCAG CTACATCTTC CAGTACAAGT GGCGCGTCAT CGCCATCGTG GTGTGCATCT TGGTCGGTGC CGCCGCGCAG GCCGGTTCCG CGCTGTTCCT CCAGTCGCTC ATCGACACGT ACATCCTGCC GATGGTGGGG GAGTCGAACC CCGACTGGGC CCCGCTGCTG CGGGCCATCA GCCTGATGGC GTGCCTGTAT GTGGCCGGCA TCGTGGCGTC CTGGCTGTGG CAGTGGCTGA TCGTCACCGT CGAGCAGGGC ACGCTCAAGA AGATTCGTGA CGACATGTTC GCCCACCAGC AGAAGCTGCC GATCCGCTAC TTCGACAGCC ACGAGCACGG CGACATCATG AGCCACTACA CCAACGACAC CGATACGCTG CGCCAGGCCA TCTCGCAGTC GTTCCCGCAG ATGTTCTCCT CGATTATCTC CGCGGTCGCG GCGCTGCTGT CCATGCTGTG GCTGTCCATT CCATTCACCG CGTTCGTAAT CGTGTTCACC GTTCTGCTCT ACTTCATCGT GCGCAAGATC GTGAGCCGCT CCGGCCGCTA CTTTGTCAAG CAGCAGCAGT GGATCGGCGA CGTGAACGCC TTCGTGGAGG AATCCGTCAA CGGCCAGAAG GTCATCAAGG TCTTCAACCA TGAAGACGCC ACCCAGAATA CCTTCGACGA GAAGAACGAG GAACTCTTCG AGGCGTCCGC CGAAGCGAAC ACCTGGGGCA ACGTCACCAT GCCGGTCGTC GGCAACATGG GCTACCTGCT CTACATCCTG CTTGCCATCG TCGGCGCCGC CGTCTCGCTG GCCGGCGTCA ACGACATCGG TCTGACCGGT GTCAAGCCGC TCACCCTCGG CACGCTCGTC TCCCTGCTGA CCCTATCCCG CTCGTTCATC AACCCGATCG GCCAGGTCTC CCAGCAGCTG ACCATGGTGA TGATGGCGCT CGCCGGTGCC TCCCGTATCT TCAAGCTGAT GGACGAACCC ATCGAGGAAG ACAAGGGCAC CGTGACGCTC GTGAACGTGG AACTTGGCGA GGATGGCCGC ACCATGACCG AAGTCGACCA CGAGACCGGC CACTGGGCAT GGAAGCGCGA GGTCGGCGAC GACGGTACGA GGTCTCTGAA GGCCGCAGAA AAGCTCAAGG GCTCGGCCCG CGAGGTGGCG ATGAAGGCCA AGGAGCAGGC GATCACCTCG CCCGACGGCC GACTGACCCT GCTGCGCGGC GACGTGCGCT TCACCAACGT GACCTTCGGC TACAACCCGG ACAAGCCGGT GCTGCACGAC ATCACCTGGT TCGCCAAGCC CGGCCAGAAG ATCGCGCTCG TCGGCGCCAC CGGTGCCGGC AAGACCACCG TGACCAACCT CATCAACCGG TTCTACGACA TCCAGCACGG CCAGATCCTG TACGACGGCA TCTCCGTGGC CGGCATCAAG AAGCCTGACC TGCGCAGGTC TTTGGGCATC GTGCTGCAGG ACGTGAACCT GTTCACCGGC ACCGTGATGG ACAACATTCG TTATGGCCGT CTGAACGCCA CTGATGAGGA ATGCATTGAG GCCGCGCGTC TGGTCAATGC GGACAGCTTC ATCCGTATGC TGCCCGAGGG ATACAACACG GTGCTTGAGG GTGATGGATC CGGCCTGTCC CAAGGTCAGC GCCAGCTGAT TTCCATCGCC CGCGCCGCGG TGGCCGATCC GCCCGCGCTG ATTCTCGATG AGGCCACGTC TTCCATCGAT ACCCGTACCG AGGAAGTCGT GCAGGCCGGC ATGGATAACC TGATGAAGGG CCGTACGGTC TTCGTCATCG CCCATCGTCT GTCCACCGTA CGCAACTCCG ACGTGATCAT GGTGCTCGAC CACGGCAACA TCATCGAGCG TGGCTCGCAT GACGAGCTGA TCGCGCAAAA GGGCGAGTAC TATCAGCTCT ACACCGGCGC GGTGGAACTG GAGTAA
|
Protein sequence | MSNDQSFKNR KPAMGKAEPG TIKRIFSYIF QYKWRVIAIV VCILVGAAAQ AGSALFLQSL IDTYILPMVG ESNPDWAPLL RAISLMACLY VAGIVASWLW QWLIVTVEQG TLKKIRDDMF AHQQKLPIRY FDSHEHGDIM SHYTNDTDTL RQAISQSFPQ MFSSIISAVA ALLSMLWLSI PFTAFVIVFT VLLYFIVRKI VSRSGRYFVK QQQWIGDVNA FVEESVNGQK VIKVFNHEDA TQNTFDEKNE ELFEASAEAN TWGNVTMPVV GNMGYLLYIL LAIVGAAVSL AGVNDIGLTG VKPLTLGTLV SLLTLSRSFI NPIGQVSQQL TMVMMALAGA SRIFKLMDEP IEEDKGTVTL VNVELGEDGR TMTEVDHETG HWAWKREVGD DGTRSLKAAE KLKGSAREVA MKAKEQAITS PDGRLTLLRG DVRFTNVTFG YNPDKPVLHD ITWFAKPGQK IALVGATGAG KTTVTNLINR FYDIQHGQIL YDGISVAGIK KPDLRRSLGI VLQDVNLFTG TVMDNIRYGR LNATDEECIE AARLVNADSF IRMLPEGYNT VLEGDGSGLS QGQRQLISIA RAAVADPPAL ILDEATSSID TRTEEVVQAG MDNLMKGRTV FVIAHRLSTV RNSDVIMVLD HGNIIERGSH DELIAQKGEY YQLYTGAVEL E
|
| |