| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1909 |
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| Symbol | hdeD |
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| ID | 6363131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2271231 |
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| End bp | 2272211 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642681117 |
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| Product | hypothetical protein |
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| Protein accession | YP_001955852 |
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| Protein GI | 189440771 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3247] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.294784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATC CAAACGAGGG CCAGTGGAAT GGCCAGACGG GCCAGCCCAA CCAGAGCCAG
CCGAGCCAGC CGAATCCGGC GGGCCAACCG GGCCAACCGC AGTATGGCGC GTATGACAGC
AATCATGGCG GCCAATATCC TCCGCAAGGC GCGCCGGGAG CGCAAGACAC TCAGAATCAG
CAGGCGCAGA ACGGCCAGCC ACAAGGCGGA CCGAACCAGA ACCCGTACTA CGGCCCGTAC
GCCTACAATC CGAACTATGG CCCGAACGGC CAGCCGGCAT GGGGGCCGGA CGGTCGGCGG
TATCAGGCGG ACGGCCAATC GAATAGCCAA GCGGACGGGC AGCCGAATGG TCCATGGGAC
GATCAAAGTC AACCCGGCTG GCAGCAGACC AACTGGTATG TCGGCAATTT CAGTCCATTC
CGCCTGATCG AGGAATGGCT GCCGGAAAAA GCCAAGACCA AGATTCGCAT CATTTACGGC
GTGGTGGGCG TGGCCGCCAT CGCCTTGGGC GCTGCGCTGT TGCTGGTGCC GAACAAGACG
CTGGCTTTGG CCGCATTGTT GCTCGGCGTG TATTTCGTGA TTTCCGGCGT GGTGCGCATC
GTCAGCGCTC TCGTGGAGCC GGGTCTGCCG GGCGGCTGGC GTGTGCTGGA CGTGTTCGTC
GGCATTCTGC TGACCTTTGG CGGCGTGGTG GTTGTGCGCA ACTACGGCAT GACCGGTCAG
ACGCTGGCAT TACTCATTAC TTTGATGGTC GGTTTCGGAT GGATTATGGA AGGCGTGCTG
TCGCTGGTTG AATCGTGGCG TATCCCGCAT TCCGGCTGGG CCATCGCCTA TGCCATCATC
TCGATTATCG CCGGCTTCGT GGTGCTGATG AGCCCGCTGA GCTCCGCCGT ATTCATGATT
ATCTTCGGCG GATGCGCCAT GGTGGTGATG GGGATTACTT CAGTGATTCG CGCGTTCACT
TTCGGCAAGC GCAGGAAGTG A
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| Protein sequence | MSNPNEGQWN GQTGQPNQSQ PSQPNPAGQP GQPQYGAYDS NHGGQYPPQG APGAQDTQNQ
QAQNGQPQGG PNQNPYYGPY AYNPNYGPNG QPAWGPDGRR YQADGQSNSQ ADGQPNGPWD
DQSQPGWQQT NWYVGNFSPF RLIEEWLPEK AKTKIRIIYG VVGVAAIALG AALLLVPNKT
LALAALLLGV YFVISGVVRI VSALVEPGLP GGWRVLDVFV GILLTFGGVV VVRNYGMTGQ
TLALLITLMV GFGWIMEGVL SLVESWRIPH SGWAIAYAII SIIAGFVVLM SPLSSAVFMI
IFGGCAMVVM GITSVIRAFT FGKRRK
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