Gene BLD_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1900 
Symbolorn2 
ID6362832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand+ 
Start bp2255789 
End bp2256439 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content60% 
IMG OID642681108 
Productoligoribonuclease 
Protein accessionYP_001955843 
Protein GI189440762 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGACA GCCATGATGC AGAAACTTAC AGCGCAAAGG ATTCGCGCCT GATTTGGATT 
GACTGCGAAA TGACGGGCTT GGATATCTTC GGCGGCGACG AACTCGTCGA GGTGTCCGTA 
GTGCCCACTG ACTTTGACCT GAATGTGCTG GACGAGGGCG TGGATTACGT CATCAAGCCG 
TCCGAGAAGG CCGTGAACCA TATGAACGAT TTCGTGCGCC AGATGCACAC CCGTTCCGGC 
CTGATCAACG AGTGGGAGAA TGGCCTGAGC CTGGCCGAGG CCGAGCAGAA GGTCACCGAA 
TACGTGCTGC GCTTCACGCC GGAAGGCGTG CGCCCGCTGC TGGCCGGCAA CACCATTGGA 
TCCGACAAGA AGTTCCTCGA CCACTACATG CCGGACCTCA TGAGCCACCT GCACTACCGC 
AGCGTGGATG TGAGCACATT CAAGGAGCTC GCCCGCCGCT GGTATCCGGC TGTGTACGAG 
AACCGCCCGC CAAAGAACGG TGGCCATCGT GCTCTCGCAG ACATCATCGA ATCCTTGGAT 
GAGCTGCGCT ACTACCGCAA GGCCTTCATG GCCCCCGCCC CCGGCCCGGA CGATGCCGCA 
TCCAAGGCCC TCGCCGCCGA CATCGTAGCC ACCAGCATCC TCAATAAGTA G
 
Protein sequence
MVDSHDAETY SAKDSRLIWI DCEMTGLDIF GGDELVEVSV VPTDFDLNVL DEGVDYVIKP 
SEKAVNHMND FVRQMHTRSG LINEWENGLS LAEAEQKVTE YVLRFTPEGV RPLLAGNTIG 
SDKKFLDHYM PDLMSHLHYR SVDVSTFKEL ARRWYPAVYE NRPPKNGGHR ALADIIESLD 
ELRYYRKAFM APAPGPDDAA SKALAADIVA TSILNK