Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1895 |
Symbol | livF |
ID | 6362827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 2250373 |
End bp | 2251077 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642681103 |
Product | branched-chain amino acid ABC transporter ATPase |
Protein accession | YP_001955838 |
Protein GI | 189440757 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.250393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGGAAA TCAAGGATCT ATGCGTTTCC TATGGCGCGA TCGACGCGGT CAAGGGCATT AGCCTCAAGG TGAACGACGG CGAGATCGTC TCCCTGATCG GAGCCAACGG CGCCGGCAAG ACCACCACCC TGCACACCAT CACCGGTCTG GTGCCTGCCA AATCCGGCAG CATTACCTAT GATGGCCACG ATCTGCTCAA AACGCATGCG AACAAGATCG TCACGCTGGG CATGGCCCAT GTGCCGGAAG GCCGCCACGT GTTCACCCGC ATGAGCGTGC AGGAGAACCT AGAGATGGGC GCGTTCAGTC TCAAAGACCA GTCCAGTCTG GGTAAGGATC TTGAGATGGT GTTCGACTAC TTCCCGCGTT TGAAGGAACG TCGCCGCCAG CTGGCCGGCA CGCTTTCCGG CGGTGAGCAG CAGATGGTGG CCATGGGCCG CGCCCTGATG AGCCATCCGA AGACCATCCT CATGGATGAG CCGTCGATGG GTCTGTCCCC GCTGCTGGTC AAGGAGATCT TCGACATCAT CGTCACGCTG CGCAAGCGTG GCATCACCGT GCTGCTCGTG GAGCAGAACG CGAAGATGGC CCTGTCCATC GCGGATCGCG CCTACGTGCT CGAGACCGGC AAGATCACCA TGGAGGGCAA GGCCTCCGAC CTGCTGCACG ACGAGAAGGT GCGCAAGGCG TACCTCGGCG CGTGA
|
Protein sequence | MLEIKDLCVS YGAIDAVKGI SLKVNDGEIV SLIGANGAGK TTTLHTITGL VPAKSGSITY DGHDLLKTHA NKIVTLGMAH VPEGRHVFTR MSVQENLEMG AFSLKDQSSL GKDLEMVFDY FPRLKERRRQ LAGTLSGGEQ QMVAMGRALM SHPKTILMDE PSMGLSPLLV KEIFDIIVTL RKRGITVLLV EQNAKMALSI ADRAYVLETG KITMEGKASD LLHDEKVRKA YLGA
|
| |