| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1892 |
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| Symbol | livH |
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| ID | 6363618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2247497 |
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| End bp | 2248423 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642681100 |
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| Product | branched-chain amino acid AbC-type transport system permease |
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| Protein accession | YP_001955835 |
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| Protein GI | 189440754 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.339228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC AGATCATCAT GTTCATCAGC CAGCTGTTCA ACGGTCTGAA AATCGGCAGC
GTGTACGCGC TGGTGGCATT GGGCTACACC ATGGTCTACG GCATCATCCG ACTGATCAAC
TTTGCCCACG GCGATTTCAT CATGGTCGGA GCCTACGTGC TCATGCTCAC CATTCCGGCC
ATCGTGGCCA TGGGACTGCC CGCCTGGGTG GCGGTCATTC CCGCCATCCT GGTATGCGTG
GCCGTCGGCG TGATCGTCGA AAAGGCCGCC TATAAGCCGG TGCGTGAAAA GGGCAACTCC
ATGACCGCCC TGATCACCGC CATCGCCATG TCGTTGCTGC TGGAGAACGG CTCACAGGCC
ATCTTCGGCG CCGACTTCCA GACCGTCCCG ACCATCTTCC ACCTGCCGTC CATCGCGTTC
GGCAAGCTCA AGCTGCCGGG AGACACCCTG CTGACCATCG TCATCGGCCT GGTCATCATG
GTGGGCCTGC AGCTGTTCGT CAAATTCACC AGGCAGGGCA AGGCCATGCG CGCCGTCTCC
GAAGACAAGG AGGCCGCCGT GCTCATGGGT ATCAACGTGA ACTCCACCAT CGCCCTGACA
TTCGCCATCG GCTCCGGTCT GGCCGCGGTC GCCTCGCTGA TGTACTGCGC CGCCTACCCG
CAGGTCTCGC CTATGATGGG CGCCATGCTG GGCCTGAAGG CGTTCGTCGC CGCCGTGCTC
GGCGGCATTG GTTCCATCCC GGGCGCCATG ATCGGTGGTC TGGCCATCGG TCTGATCGAA
AGCCTGACCA AGGCGTATAT CGGCACCATC ACGGCGGGCA TCATCACCTC GGCGTTCTCC
GACGCCATCG TGTTCGCCAT CCTGATCATC GTGCTGCTCG TCAAACCGTC CGGCATTATG
GGCAAGAACG AAGGGGAGAA GGTCTGA
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| Protein sequence | MTDQIIMFIS QLFNGLKIGS VYALVALGYT MVYGIIRLIN FAHGDFIMVG AYVLMLTIPA
IVAMGLPAWV AVIPAILVCV AVGVIVEKAA YKPVREKGNS MTALITAIAM SLLLENGSQA
IFGADFQTVP TIFHLPSIAF GKLKLPGDTL LTIVIGLVIM VGLQLFVKFT RQGKAMRAVS
EDKEAAVLMG INVNSTIALT FAIGSGLAAV ASLMYCAAYP QVSPMMGAML GLKAFVAAVL
GGIGSIPGAM IGGLAIGLIE SLTKAYIGTI TAGIITSAFS DAIVFAILII VLLVKPSGIM
GKNEGEKV
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