Gene BLD_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1891 
SymbollivK 
ID6363617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp2246068 
End bp2247255 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content63% 
IMG OID642681099 
Productbranched-chain amino acid ABC transporter periplasmic protein 
Protein accessionYP_001955834 
Protein GI189440753 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTGA AGTTCTCCAC TAAGTTCGTT GCGGCCAGCG CGGCCGCTGT TATGGCGTTG 
TCCCTCGCGG GCTGCTCCGG CGGCAGCATG GATGATTCCT CCAGCTCCAG TGCCAAGGCC
TCCGGCGACT CCATCACCAT CGGCACCGTG ACCACCAACT CCGGTACCGC CGCCGCTTAC
GGCGAGGCCG AGGTCAAGGG CTTCGAGCTG GCGGTCTCCG AGATCAACGC CAAGGGCGGC
ATCAACGGCA AGAAGGTCAA GCTCGAGTCC ATGGACGACA AGGGCGACGC CACCGAAGCC
TCCAACGCCT ACAACAAGCT CGCCGGCGAC AACAACGTGC TCGCCGTGGC CGGCCCGACC
ATTTCCGCCA CCACCGCAGC CGTGGCCCCG CTGGCCGACC AGTCCAAGCT GGTCACCATC
GCCCCGGCCG CCACCTCCGA CTCCATCGAA ACCGGCAATT ACCTGTTCCG CACCTGCTTC
AAGGACTCCT ACCAGGGTGA GGTGGCTGCA CGCTTCGCCG CCGAGAACCT GAAGGTCAAG
AAGGTGGCCG TGCTCTACGG CACCGGCGAT CCGTACTCCT CCGGCGTGGG AGAGGCCTTC
GCCAAGGCCG CCGAAAAGCT CGGCCTCGAA GTGGTGGACA AGGAAAGCTC CTCCTCCGCC
GACGACACCG AGTACTCCGC CCAGCTGCAG AAGATCCAGG CTTCCGGCGC CGAGCTGCTC
TACGCTCCGT ACTACTACTC CGTGGCTGGC CCGTACATCA TCCCGCAGGC CCGCTCCGTG
GGTTTCGAGG GCTACGTGAT GGGACCCGAC GGATACGATG GCCTCAAGCT CACCGGTGAC
AAGTCCCAGT ACAACAAGAC CTACTACACC ACCCACTACT CCGCCGACGA CAACACCAAC
ACCAAGGTGC AGGACTTCAT CAAGTCCTAC AAGTCCAAGA ACAACGCCGA GCCGAACACG
TTCGCCGCTC TGGGCTACGA CACCATCTAC ATGATCAAGC AGGCCATCGA GAAGGCTGGC
GAGAACGCCA CCCGTGAGGA TGTGCGCAAC GCCGTGGCCG GCATGACCTT CGACGGTGTG
ACCGGCAAGT TCACCATGGA CAAGTCCGGC TCGCCGACCA AGTCCGTGAC CGTGCTGGAA
ATGAAGGACG GCAAGCCGGT GTACAACACC ACCGTGCAGC CCAAGTGA
 
Protein sequence
MNVKFSTKFV AASAAAVMAL SLAGCSGGSM DDSSSSSAKA SGDSITIGTV TTNSGTAAAY 
GEAEVKGFEL AVSEINAKGG INGKKVKLES MDDKGDATEA SNAYNKLAGD NNVLAVAGPT
ISATTAAVAP LADQSKLVTI APAATSDSIE TGNYLFRTCF KDSYQGEVAA RFAAENLKVK
KVAVLYGTGD PYSSGVGEAF AKAAEKLGLE VVDKESSSSA DDTEYSAQLQ KIQASGAELL
YAPYYYSVAG PYIIPQARSV GFEGYVMGPD GYDGLKLTGD KSQYNKTYYT THYSADDNTN
TKVQDFIKSY KSKNNAEPNT FAALGYDTIY MIKQAIEKAG ENATREDVRN AVAGMTFDGV
TGKFTMDKSG SPTKSVTVLE MKDGKPVYNT TVQPK