Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1886 |
Symbol | xylB |
ID | 6363612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 2240072 |
End bp | 2241592 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642681093 |
Product | Xylulose kinase |
Protein accession | YP_001955829 |
Protein GI | 189440748 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | [TIGR01312] D-xylulose kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000234527 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGAGAG TACTGGTTGC CGGCGTAGAT ACGTCAACCC AATCAACGAA GGTCCGCATC ACGGACGCCG CCACCGGCGA ACAGGTTCGG TTCGGGCAGG CCAAGCACCC GGATGGCACC TCGGTCAACC CGGAATTCTG GTGGGAGGCC TTCACCAAGG CCGCCGAGCA GGCCGGCGGG CTTGACGATG TCGCGGCCCT CGCGGTTGGC GGCCAGCAGC ATGGCATGGT CATTCTCGAC AAGCAGGGCA ACGTGATTCG CGATGCGATG CTCTGGAATG ACACCAGTTC CGCCCCGCAG GCCGCCGCCT TGATCGACAA GCTCGGTGCA GCTCCGGCCG AGGGCGACGA ACCGGACGAC GTGACCGCCC GCGGCAAGCA ACGCTGGGTC AAGGCCGTCG GATCCTCCCC CGTCGCCTCC TACACGCTGA CCAAGGTGGC GTGGGTGGCC GAGAACGAGC CTGAGAACGC CAAGAAGATT GCCGCCGTCT GTCTGCCGCA CGATTGGCTG AGCTGGCGTA TCGCCGGCTA TGGCCCGGTG GCCGAGGGCG AGGACGCTCA TCTCGAAGCC CTGTTCACCG ACCGTTCCGA CGCTTCCGGC ACCATTTACT ACGATGCCGC GCATGACGAG TACCGCCGCG ATCTCATCGC CATGGTGCTG GCCCCTGCCG AGGGCGAGGA AGCCGCCAAG GTCCACGCCG ACGCCATTGT GCTGCCCACC GTGCTGGGCC CGCGTGAGGC AGCCGCCGTC AAGGCCGACC CCGCCATTGC CGGCAAGGAC GTTGAAGGCG GCTGCATCAT CGGCCCCGGC GGCGGAGACA ATGCCATGGC CTCGCTGGGC CTCGGCATGG CCGTGGGCGA TGTGTCCGTA TCGCTCGGCA CTTCCGGCGT GGCCGCGGCC ATCGCTGAAA ACCCGGTGTA CGACCTGACC GGCGCCATTT CCGGCTTTGC CGACTGCACC GGCCACTATC TGCCGCTCGC CTGCACAATC AACGGTTCGC GCATTCTGGA CGCCGGTCGC GCCGCCCTAG GCGTGGACTA CGACGAACTG GCCGAACTGG CGTTCAAGGC CGAGCCGGGT GCCGGCGGCA TCACCCTGGT GCCGTACTTC GACGGCGAGC GTACGCCGAA CCGTCCGGAC GCCACCGCCT CGCTGACTGG CCTGACCCTA CACAACACCA CCAAGGAGAA TCTGGCCCGT GCGTTCGTCG AAGGCCTGCT GTGTTCCCAG CGCGACTGCC TCGAGCTGAT TCGCTCGCTG GGCGCCGAGA TCAACCGCAT CCTGCTCATT GGTGGCGGCG CGAAGTCCGT GGCCATCCGC ACGCTGGCCC CCTCAATCCT CGGCATGGAC GTGACCCGTC CGGCCACCGA CGAATACGTG GCCATCGGCG CCGCCCGTCA GGCCGCCTGG GTGCTGTCCG GCGAGGCCGA ACCGCCGACC TGGCAGCTCA CCATCGAGGG CGTGGAGACC GGCGAGCCCA CCGAAGCCGT GTACGAGGCG TACGCCAAGG CCCGCGGCTG A
|
Protein sequence | MTRVLVAGVD TSTQSTKVRI TDAATGEQVR FGQAKHPDGT SVNPEFWWEA FTKAAEQAGG LDDVAALAVG GQQHGMVILD KQGNVIRDAM LWNDTSSAPQ AAALIDKLGA APAEGDEPDD VTARGKQRWV KAVGSSPVAS YTLTKVAWVA ENEPENAKKI AAVCLPHDWL SWRIAGYGPV AEGEDAHLEA LFTDRSDASG TIYYDAAHDE YRRDLIAMVL APAEGEEAAK VHADAIVLPT VLGPREAAAV KADPAIAGKD VEGGCIIGPG GGDNAMASLG LGMAVGDVSV SLGTSGVAAA IAENPVYDLT GAISGFADCT GHYLPLACTI NGSRILDAGR AALGVDYDEL AELAFKAEPG AGGITLVPYF DGERTPNRPD ATASLTGLTL HNTTKENLAR AFVEGLLCSQ RDCLELIRSL GAEINRILLI GGGAKSVAIR TLAPSILGMD VTRPATDEYV AIGAARQAAW VLSGEAEPPT WQLTIEGVET GEPTEAVYEA YAKARG
|
| |