Gene BLD_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1881 
Symbol 
ID6362748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp2236561 
End bp2238276 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content61% 
IMG OID642681088 
Producthypothetical protein 
Protein accessionYP_001955824 
Protein GI189440743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000514477 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAT ATCATGTTTC CGCGCAGGCG GCGAAGACGA ACGGCGCCGG CAGCGCGGCC 
GACCCGTTTC TGACCATCGG CCAAGCGGCG GCCATCGCCC GAGCCGGCGA TGAGGTGGTT
GTGCATGCCG GCACCTATCG GGAATCTGTC GACCCCCGAT TCGGCGGAGA GAGCGCCACG
AACCGCATCG TCTACCGCGC GGCCGCGGGC GAACCGCGCC CGGTAATCAC CGGCTCCGAA
CGTATCGACA CATGGCAGCC CGAAGGCGAT GGCGTGTGGA AAGCCGTAAT CCCGAACGCA
TTCTTCAACG GATACAACCC GTACGTGGAA ACCGTATTCG GCGATTGGAC CGTATACCCG
GACCCAAAGG TCGAGGTACG CCACCTGGGC GATGTGTATC TGAATGGCAA ATCCTTCTAC
GAAGTCGCCT CGCTGGACAA GGTGCGCAAC CCACAGCGTT GGGATACCGG CCGTGACGCC
GCCACCGATT CCATCGTGCC GCTGATTGAT CCGGATGCCA CCGTGAACGT GTGGTGCTGT
GCGGTCGATG ATGAGGCCAC AACCATTTGG GCCAATTTCC ATGAAGCCGA CCCGAATGCG
GAACTTACCG AAATCAACGT GCGCGAGACC TGTTTCTACC CGAGCCGCCC GTTCGTCAAT
TACATTACGG TCTCCGGCTT TGAAATGGCG CAGGCGGCCT GCCCTTACAC GCCGCCGACT
GCCGATCAGG TCGGGCTGGT GGGCCCGCAT TGGTCCCGCG GGTGGGTTAT CGAAAACAAT
CGCATTCATG ACGCGAAATG TTCGGCGATC TCGCTGGGCA AGGAGATTTC CACCGGCGAC
AACGAATCGA CGCGCACCCA TCGTAAGTCC GGGTACCAAT ACCAAAAAGA GGCCGTCTAC
AAGGCGCTGC ATGCCGGCTG GGAGAAAGGC GTAGTCGGCG GGCACGTGGT GCGCGGCAAC
GTAATCTACG ACTGCGGCCA GAATGGTGTG GTTGGTCATA TGGGCTGCGC CTTCTCGCTG
ATTGAAGGCA ACCACATATA CCGCATCGGC TCCAAGCGCG AGTTCTTCGG CTGGGAAGTG
GCCGCCATTA AAATGCACGC AGCCGTCGAC ACGGTGGTGC GCGGCAACCG GGTGCATGAT
TCGGTGCTGG GTATGTGGCT CGACTGGCAG GCGCAGGGCA CCGTGGTGGA TTCGAACGTG
TTCTACCGCA ACACGCGAGA TGTGATGACC GAGGTGACCC ACGGGCCGAT TACGTTTATG
AACAACGTGT TTGCCTCCGA GTTCAGTTTC GACGATTATG CGCAAGGCGC GGCGTTCGTC
AACAATCTGT TCGCCGGTCG CATTCGTCAC ACCGCCGTCT TGGACCGATC CACGCCATAC
CATTTCCCGC ACGTCACCGA TGTGGCCGGC GAGGCATTCG TCTACGGTGG CGATGATCGG
TACGTCAACA ACCTGTTCTT GGCTGTGGAC GATTCCGCCA AACCGTTGTG TACCGCGGAT
GCCGCCGGTG CGGCCGGTAT GGCGGAAGCT GGAACCGCGT TCTTTGACGG CTATCCGCGC
TCGCTTGAGG AGTATGAACA GCTGATTGAA GAGGCTGGCC TTGGCGATGA GGAGTTGTAT
CGCAGCGTGA AGCAGCCGGT ATTGCTGGCT TCGAACGCCT ATGTTTCGGG CGCGAAGGCC
GCTTCCGGGC GAAGCCGAGG CCGTGGTGAG TGGTGA
 
Protein sequence
MTQYHVSAQA AKTNGAGSAA DPFLTIGQAA AIARAGDEVV VHAGTYRESV DPRFGGESAT 
NRIVYRAAAG EPRPVITGSE RIDTWQPEGD GVWKAVIPNA FFNGYNPYVE TVFGDWTVYP
DPKVEVRHLG DVYLNGKSFY EVASLDKVRN PQRWDTGRDA ATDSIVPLID PDATVNVWCC
AVDDEATTIW ANFHEADPNA ELTEINVRET CFYPSRPFVN YITVSGFEMA QAACPYTPPT
ADQVGLVGPH WSRGWVIENN RIHDAKCSAI SLGKEISTGD NESTRTHRKS GYQYQKEAVY
KALHAGWEKG VVGGHVVRGN VIYDCGQNGV VGHMGCAFSL IEGNHIYRIG SKREFFGWEV
AAIKMHAAVD TVVRGNRVHD SVLGMWLDWQ AQGTVVDSNV FYRNTRDVMT EVTHGPITFM
NNVFASEFSF DDYAQGAAFV NNLFAGRIRH TAVLDRSTPY HFPHVTDVAG EAFVYGGDDR
YVNNLFLAVD DSAKPLCTAD AAGAAGMAEA GTAFFDGYPR SLEEYEQLIE EAGLGDEELY
RSVKQPVLLA SNAYVSGAKA ASGRSRGRGE W