| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1871 |
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| Symbol | xylA |
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| ID | 6364470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2224568 |
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| End bp | 2225917 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642681078 |
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| Product | xylose isomerase |
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| Protein accession | YP_001955814 |
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| Protein GI | 189440733 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.322052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCTGT GGGATGTTGA CAAGATCGAG TACGTCGGCC GCGCCAAAGG ACCGAAGGAA
GACTTCGCCT TCCATTACTA CGATGCCGAC AAGGTCGTTG CCGGCAAGAA GATGAAGGAT
TGGCTGCGCT TCGGCGTTGC TTGGTGGCAC ACCTTCAATC AGGAACTGGT TGATCCGTTC
GGCACCGGCA CCGCGCACCG CCCGTACTAC AAGTACACCG ATCCGATGGA CCAGGCTCTG
GCCAAGGTCG ACTACGCCTT CGAGCTGTTC CAGAAGCTGG GTGTTGAGTA CTTCTGCTTC
CATGATCGTG ACATCGCCCC CGAAGGCGAC ACCCTGCGCG AGACCAACGC CAACCTCGAC
AAGGTCGTCG ACAAGATCGA GGAGAACATG AAGTCCACCG GCGTCAAGCT GCTGTGGAAC
ACCTCCTCCC TGTTTACCAA CCCGCGCTTC GTGTCCGGCG CCGCCACCTC CCCGTTCGCC
GACATCTACG CCTACGCCGG CGGCCAGCTC AAGAAGAGCC TGGAGATCGG CAAGCGCCTG
GGCGCCGAGA ACTACGTGTT CTGGGGCGGC CGCGAAGGCT ACGAGAACCT GTGGAACACC
GAGATGAAGC GCGAGACCGA CCACATCGCC AAGTTCTTCC ACATGTGCGC CGACTACGCC
AAGGAAATCG GCTTTGAGGC CCAGTTCCTG ATCGAACCGA AGCCGAAGGA GCCGACGCTG
CACCAGTACG ACTTCGATGC CGCCACCGCC ATCGAGTTCC TGCGCAACCA CGACCTGACT
GACGTCTTCA AGCTGAACCT GGAAGGCAAC CACGCCAACC TGGCCGGCCA CACCTACCAG
CACGAGATCC GCGTGGCCCG CGAATCCGGC TTCCTCGGCT CCCTCGACGC CAACCAGGGC
GACAAGCTCA TCGGCTGGGA TATGGACGAG TTCCCGACCG ACCTGTACGA GACCGTCGCC
GTCATGTGGG AAGTCCTGCA GGCCGGCTCC ATCGGACCTC ACGGTGGTCT GAACTTCGAC
GCCAAGCCGC GCCGTACCTC CTTCTACGAG GAGGACCTGT TCCGCTCCCA CATCGCCGGC
ATGGACACCT ACGCCGCCGG CCTGCTGGTT GCCGACAAGA TGAACCAGGA CGGCTTCATC
CAGGACCTCA TGGCCGAGCG CTACAGCTCC TACGATTCCG GCATCGGCAA GGACATCGAC
GAGGGCAACG TGACCCTGGC CGACCTCGAA GCCTACAGCC TCGACAAGCC GCAGTCCGAG
CTCATCGCCG CCACCAAGTC CGATCACCTC GAGTCCGTCA AGGCCACGAT CAACAACTAC
ATCATTGATG CCCTGTCTGA GGTCGAGTGA
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| Protein sequence | MGLWDVDKIE YVGRAKGPKE DFAFHYYDAD KVVAGKKMKD WLRFGVAWWH TFNQELVDPF
GTGTAHRPYY KYTDPMDQAL AKVDYAFELF QKLGVEYFCF HDRDIAPEGD TLRETNANLD
KVVDKIEENM KSTGVKLLWN TSSLFTNPRF VSGAATSPFA DIYAYAGGQL KKSLEIGKRL
GAENYVFWGG REGYENLWNT EMKRETDHIA KFFHMCADYA KEIGFEAQFL IEPKPKEPTL
HQYDFDAATA IEFLRNHDLT DVFKLNLEGN HANLAGHTYQ HEIRVARESG FLGSLDANQG
DKLIGWDMDE FPTDLYETVA VMWEVLQAGS IGPHGGLNFD AKPRRTSFYE EDLFRSHIAG
MDTYAAGLLV ADKMNQDGFI QDLMAERYSS YDSGIGKDID EGNVTLADLE AYSLDKPQSE
LIAATKSDHL ESVKATINNY IIDALSEVE
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