Gene BLD_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1858 
Symbol 
ID6363467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp2213300 
End bp2214469 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content61% 
IMG OID642681065 
ProductNagC family Transcriptional regulator 
Protein accessionYP_001955801 
Protein GI189440720 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000905056 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAA GGCTTTTCGG TTCGCAGACC TCGCTTCGCG AGGCAAACCG CGCCAACTTG 
CTGGCCAGCA TCCACAAGTT CGGCGCCATG ACACAGGTCG AACTCGCAGA GGTGACAGGA
CTGTCCACTG CGACCGTGTC CACGCTCGTC CATCAGCTCG TCGACGAAGA CCAGCTGGAG
ACCAAAAGCA CCGTTCGCAA CGGTCGCAGA GCCACTCTGG TGACCCTTGC ACGGCATCAG
GGCCTCGGCG TCGGGCTTTG GATCGCGCGA CGTCATCTTA CGCTTTCTAT CGTTGACTTC
TCGAAGTCAA TCATCGCTGA GCACACGCTC CCCCTGCCGT TGGGCCACAA GGCGGACACA
ACGCTGGAAC GCGCCATGCT GCTCATCAAT GAGACCCTGA GCAGCATCGA CGCCGAAGCC
AGCGAGCTGG TCGGCATCGG CGTGGCCGTG GCCGCACCGG TGGCCACCAG CGACCACACC
ATAGCGATTC CCGGCATTCT GCCCGGATGG GACGGCGTCG ATATCACGTC CCCGTTGCGC
ACGGCGTTCA ACGTTCCCGT ATACGTCGAT AATGACGCGA ATTTCGCGGC ATACGGCGAA
TCCCGTATGG GCGTGGCGGC AGGCAAACGC AATTTCGTAT ATATCTCAGC CAGCGACGGG
GTTGGCGCAG GCATCGTCAT CAACGGCGAA ATCATGCATG GCGTGACCGG CCTGGCCGGT
GAAATCGGCC ATATCCAGGT CGACCCGCTG GGTGCCATCT GTTCGTGCGG CAACCGCGGC
TGCCTTGACA CCGTCGTGGC GGAAAACAGG CTGGTGCAGT TGCTCAGCGT CACACACGGC
AATATGACGC TGGATGATCT GGTGTCCTTT GCCAACGAAG GCGACCCCGG TTGCCGTCGC
ATCATCGCCG ACGCGGCCGT GCGTATCGGT CAGGTGGCGG CTGATCTGTG CATCAGCGTG
GATCCGGAGG TCATTGTGCT CGGCGGCAAG CTGGCCATGA CCGGCGACGT ATTCATCCAA
CCGTTCAATG AAGCGTTGCA GCGCATGCTG TTCCCTGATG CCGTGGCACC CATCGATGTA
CTCGTGTCAT CCCACCCGGA CGACAATTGC GCGCTAGGCG GCGCATTATG CGCCATCGAG
TTCTCGGTTC GCAATGACGT CAGCCAGTGA
 
Protein sequence
MATRLFGSQT SLREANRANL LASIHKFGAM TQVELAEVTG LSTATVSTLV HQLVDEDQLE 
TKSTVRNGRR ATLVTLARHQ GLGVGLWIAR RHLTLSIVDF SKSIIAEHTL PLPLGHKADT
TLERAMLLIN ETLSSIDAEA SELVGIGVAV AAPVATSDHT IAIPGILPGW DGVDITSPLR
TAFNVPVYVD NDANFAAYGE SRMGVAAGKR NFVYISASDG VGAGIVINGE IMHGVTGLAG
EIGHIQVDPL GAICSCGNRG CLDTVVAENR LVQLLSVTHG NMTLDDLVSF ANEGDPGCRR
IIADAAVRIG QVAADLCISV DPEVIVLGGK LAMTGDVFIQ PFNEALQRML FPDAVAPIDV
LVSSHPDDNC ALGGALCAIE FSVRNDVSQ