| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1777 |
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| Symbol | lysS |
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| ID | 6364419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2126394 |
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| End bp | 2128076 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642680980 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001955720 |
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| Protein GI | 189440639 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0105014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAG TTGTCGAAAA TACCGAAAAC ACTGAGAATG AAACCCCGGC CGTCCCGCAG
ATGAGCACCG TCGAACGTGC GGAAATGCTG CTCAAGCAGG ACGCCACCAT CCGCGAGAAG
ATCAAGTCCG GTGCCACGCT GGACGAAGCC GTGGACCCCT CCAACAAGGA GTTCGGCCCG
CTGGCCCACC CCGAGCAGGT GCAGATGCGC GTGGCCAAGC GCGCGATGAT GCTTGAGGCC
GGCATTGCCC CCTACCCGGT GCACTTGGAC GTCACCGACA CCATCGAGGC GGTTCGCGCC
AAGTATGACG GCAAGCTCGA GGCTGGCGAA GAGACCGAAG ACATGGTCGG CATTGCTGGC
CGCGTGCTGT TCCTGCGCAA CGCGGGCGGC CTGTGCTTCG TGCAGCTGTC CGCCGGTGAC
GGCACCAAGA TTCAGGGCAT GATCTCCAAG AAGGAGATTG GCGCCGACTC GCTCAAGCAG
TTCAAGCAGC TCGTCGACCT TGGCGATCAC CTGTACCTCA AGGGCCGCGT CATCGCCTCC
AAGACCGGCG AGCTGTCCGT ATTCGCCACT GAGTGGGCTA TCGCCTCTAA GGCCCTGCAG
CCGCTGCCGG CCCTGCACAA GGACCTGAAC GAAGACACCC GCACCCGCAA GCCGTACATC
GGCATGATCG CGGACGAGAA CATCCGCAAC ATGGTGCGCA ACCGCTCCAA GGCCGTGGCC
TCCCTGCGCC GCACCTTTGA CGACCACGAC TTCCTCGAGG TCGAAACCCC GATGCTGCAG
ACCCTGCACG GTGGCGCGGC CGCCCGCCCG TTCACCACGC ACATGAACGC CTTCGACCTT
GACCTGTACC TTCGCATCGC CCCGGAACTG TTCCTCAAGC GCTGCCTGGT CGGCGGCATC
GATCGCGTGT TCGAAATCAA CCGTGACTTC CGCAATGAGG GCGTCGACGC CACGCACGCC
CCCGAATTCA CCATGGTCGA GGCCTACCAG GCCTATGGCA CCTATGATTC CATCGGCCAG
CTGGTCAAGG AGCTCGTGCA GAAGACCGCC ATGGACGTCT ACGGCTCGCA CAAGGTCACC
CTGCTCGACG GCACCGAATA CGACTTCGGC GGCGAATGGA AGACCATCAG CATGTACGAC
TCCCTGTCCG AATCGTTGGG CGAGGAGATT GTGCCGAACG GCGGCCCGGA CGCCCCCGGC
ACCTCCGTTG AGCACCTGGG CGCCATCGCC GACAAGCTCG GCGTAGAGCG CGACGACGTG
GAGAACCACG GCAAGCTCGT CGAACACCTG TGGGAGCACT TCTACGAGGA CAAGCTTTAC
GAGCCCACCT TCGTGCGTGA CTTCCCGGTC GAAACCTCCC CGCTGGTCAA GGGCCACCGC
ACCAAGCCCG GCGTGGTGGA GAAGTGGGAT CTCTACGTGC GCGGCTTCGA GCTGGCTACC
GGCTACTCCG AGCTCAACGA CCCGATCGTG CAGCGTGAAC GTTTCGTGGC TCAGGCCAAG
GACGCGCTCG CTGGCGACGA AGAGGCTTGC GACATCGATG AGGACTTCCT CGAGGCTCTC
GGCGTGGGCA TGCCTCCGGC CGGCGGTATG GGTATGGGTA TTGATCGACT GCTTATCGCC
TTGACCGGTG CCACGATTCG CGAGACCATC ACCTTCCCGC TGGTCAAGCC GCTCGTTGGC
TGA
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| Protein sequence | MAEVVENTEN TENETPAVPQ MSTVERAEML LKQDATIREK IKSGATLDEA VDPSNKEFGP
LAHPEQVQMR VAKRAMMLEA GIAPYPVHLD VTDTIEAVRA KYDGKLEAGE ETEDMVGIAG
RVLFLRNAGG LCFVQLSAGD GTKIQGMISK KEIGADSLKQ FKQLVDLGDH LYLKGRVIAS
KTGELSVFAT EWAIASKALQ PLPALHKDLN EDTRTRKPYI GMIADENIRN MVRNRSKAVA
SLRRTFDDHD FLEVETPMLQ TLHGGAAARP FTTHMNAFDL DLYLRIAPEL FLKRCLVGGI
DRVFEINRDF RNEGVDATHA PEFTMVEAYQ AYGTYDSIGQ LVKELVQKTA MDVYGSHKVT
LLDGTEYDFG GEWKTISMYD SLSESLGEEI VPNGGPDAPG TSVEHLGAIA DKLGVERDDV
ENHGKLVEHL WEHFYEDKLY EPTFVRDFPV ETSPLVKGHR TKPGVVEKWD LYVRGFELAT
GYSELNDPIV QRERFVAQAK DALAGDEEAC DIDEDFLEAL GVGMPPAGGM GMGIDRLLIA
LTGATIRETI TFPLVKPLVG
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