| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1759 |
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| Symbol | sphK2 |
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| ID | 6363295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 2101770 |
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| End bp | 2102951 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642680960 |
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| Product | sphingosine kinase |
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| Protein accession | YP_001955702 |
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| Protein GI | 189440621 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCAGC CTGCCCTCAC CGTGTTTCTG ATCATCGCCG CAATCGCCAT TGTGGTGGTG
CTCATCGCCG TCATCGTCAT CGCTCTGCGC GCGCAGCGCC GCCGCAAGCT GGCTCAGACG
CTGGAGAAGC GCCGGGACGA CGAGGTGCAG TACGCCTTCA TCGTGAATCC GTCCAAACCG
CAGGCCGAAG CCCGCCGGCT GCATATCCAG AGGTTCTGCG AGGCCAAGGG GCTCAATCGC
ATCCGCTTCT ACGACACCCA GCTTGACAAG GACGGCAGGG TCTGCGCGCT TGAGGCGCTG
GAGGACGGCG CCGACGTGGT GATCGCGGTC GGCGGCGACG GCACGGTGCG CACGGTGGCG
AGCGCCGTCT CCGGCACCGG CCATGCGCTG GGCATCATCC CCATCGGCAC CGGCAACCTG
TTTGCCCGCA ATATGGGCGT TCCCGTGGAC GATATCGACG CCGCGCTGAC CGTGGCCACC
TCCCACGGCT CCCGCCTGGT GGACATGGGC CGTCTCACCC TGCTCGACCA CCCGGAGGAC
GACCACGGCC ACGCCTTCCT CATCATCGCC GGCATCGGCT TCGATGCGGC CATGATCGAC
GACACCAACC CCGAGCTCAA GGCGAACATC AGCTGGCTCG CCTACTTCGT GGGCGGCGTG
AAGAACCTGT TCGCGCCGAA GTTCCGCGGC ACGCTGACAG TCACCAGCGC CGACGGCTCG
ACCCACACCA TCAAGAATCT CGATTTCCGC ACGGTGATGG CCGGCAACTG CGGCCAGATT
CCCATGTTCT CGCTGATGCC GGCGGCATCC TATGACGATG GTCTGCTGGA CTTCGAAATC
ATCGACACCA CCGGCGGCAT CCTCGGCTGG GCCAACCTGT TCGGCGACGT GGTGCACCAG
ACGATCATCG GCAAGCCCGA ACAGAACCCG CTGTCCACGA ACTCGACCAT CGAACAGGTC
CAGGGTGTCA GTGCCGAAAT CACATTGGAA AAGCCGGCCA AAGCGCAGGT GGACGGCGAC
ATGCTACCGG AGACCAAACA TATTCGTTTC TCAGTGGATC ATCGCGCGCT GATCGTGCGC
GTACCCGACG CCTCCGCGCT GGAAAAGACC GCACAGGCCG CTGCCTCAAA CGCCACCTCG
GATTTCGCCG AAATGACCGG CACGCTCGAG CCGATTCGCT GA
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| Protein sequence | MPQPALTVFL IIAAIAIVVV LIAVIVIALR AQRRRKLAQT LEKRRDDEVQ YAFIVNPSKP
QAEARRLHIQ RFCEAKGLNR IRFYDTQLDK DGRVCALEAL EDGADVVIAV GGDGTVRTVA
SAVSGTGHAL GIIPIGTGNL FARNMGVPVD DIDAALTVAT SHGSRLVDMG RLTLLDHPED
DHGHAFLIIA GIGFDAAMID DTNPELKANI SWLAYFVGGV KNLFAPKFRG TLTVTSADGS
THTIKNLDFR TVMAGNCGQI PMFSLMPAAS YDDGLLDFEI IDTTGGILGW ANLFGDVVHQ
TIIGKPEQNP LSTNSTIEQV QGVSAEITLE KPAKAQVDGD MLPETKHIRF SVDHRALIVR
VPDASALEKT AQAAASNATS DFAEMTGTLE PIR
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