| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1747 |
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| Symbol | sms2 |
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| ID | 6364515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 2085677 |
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| End bp | 2087215 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642680948 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001955690 |
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| Protein GI | 189440609 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAT CAAGTGTGCA GTATGTATGT TCCGAATGCG GTTGGAACGG GCCGAAGTGG
TACGGCCGTT GCCCCGAGTG TGGTCAGTGG GGCACGGTCG AGGAATTTCA CGAGGCTCGG
CCGGCGGCAG GCTCTCGCAC GGCCGCTCCC GGCCGAACAT CACGCACGCA GTCGGTTACG
GTTGCCAACA ACGCCAGATC TGCAGCCCGT CCGATTACCG AAGTGGGCAC GGAAAGCGTC
GAGCGGCTCG GTACCGGGTT TTCCGAATTC GACCGTGTGC TCGGCGGTGG CGTGGTGCCG
GGTTCAGTAA CGCTGATAGC GGGCGAACCG GGTATCGGCA AGTCGACATT GCTGTTGCAG
ACGGCCGGCA ATATCGCGCG CGTTGTGGCG GGAGACAGTA CGTTCCGAGG GGCAGGTCAG
CGGCCTGCCC AACAGTCGGG CCGGGCGCAG GGCAACGCAT CGAACACGGT GCCGATGCGG
GGCAACGCAT CATCAACACA CGCCAACACC GTGCTGTACA TTTCCGGCGA GGAATCACAG
GCGCAGGTTC GTTTGCGCGC TTCCCGCATC AATGCGGTGG AGCCGAACTT GTTACTGGCC
TCCACCACCG ACCTGTCCAC AGTATTGGGG CTGATCGAAC AGAACAAGCC GGCCTTGGCC
ATTGTGGATT CGGCGCAGAC CATCGTCTCG CAGGAGGTCG ATGGCATTTC CGGCGGTTCG
ACTCAGGTGC GCGAAGTGGC AAGCGCGCTG ATAGATACCG CTAAGACACT TGACATTCCA
GTATTTCTGG TTGGTCATGT GACCAAGGAT GGTTCGATTG CAGGCCCGCG CACATTGGAG
CATCTGGTCG ATGTGGTCTG CCAATTCGAA GGCGACAGCG AGACTGCGCT GAGAATGCTG
CGAGCGGTGA AGAATCGTTT TGGCCCGACC GATGAAGTCG GCTGTTTCGA CATGAGCGGT
GAAGGCATCG AAGAGGTCAC CGATCCCGCC GGATTGTTCC TGTCTGGAGA CGGCCCTGAT
GCGGCCAACG CGGCACCCGT GGAAGGCACC TGCGTGACGT TCACATTGGA TGGGCATCGC
AGTCTGCCTA TCGAAGTACA GGCTCTGGTC ACCACGTCGG TGCTGCCCAC ACCCCGTCGT
GCGGTCAATG GCGTGGACCC CAGCCGTATC GCCATGCTGG TCGCGGTGCT CTACCGTCAC
AGCAAGCTCA ACCTGCTGTC CAACGACCTG TATATCTCCA CTATTGCCGG GGGCCAGGCC
AAGGAGCCCG GTTCCGACTT GGCGATAGTG GCGGCACTGG CGAGCGCCGC CACGTCAAAA
CCCATTGCGC GAGCCACGTG CGCCATTGGT GAGATTTCCC TGACCGGTCA GGTGCGCCCG
GTACCGCGTA TGGAATATCG CCTTCGCGAG GCCGCACGCC TCGGCTTCAC CACGGCGGTC
ATTCCGCCAC TGCGCAAGCC GGTGCATGTC GAGGGACTTC AGCTGGTGGA GTCCAACACA
TTGTCCGACG CATTAGACGC CTTGGGAGTG CGTAAATAG
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| Protein sequence | MAKSSVQYVC SECGWNGPKW YGRCPECGQW GTVEEFHEAR PAAGSRTAAP GRTSRTQSVT
VANNARSAAR PITEVGTESV ERLGTGFSEF DRVLGGGVVP GSVTLIAGEP GIGKSTLLLQ
TAGNIARVVA GDSTFRGAGQ RPAQQSGRAQ GNASNTVPMR GNASSTHANT VLYISGEESQ
AQVRLRASRI NAVEPNLLLA STTDLSTVLG LIEQNKPALA IVDSAQTIVS QEVDGISGGS
TQVREVASAL IDTAKTLDIP VFLVGHVTKD GSIAGPRTLE HLVDVVCQFE GDSETALRML
RAVKNRFGPT DEVGCFDMSG EGIEEVTDPA GLFLSGDGPD AANAAPVEGT CVTFTLDGHR
SLPIEVQALV TTSVLPTPRR AVNGVDPSRI AMLVAVLYRH SKLNLLSNDL YISTIAGGQA
KEPGSDLAIV AALASAATSK PIARATCAIG EISLTGQVRP VPRMEYRLRE AARLGFTTAV
IPPLRKPVHV EGLQLVESNT LSDALDALGV RK
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