Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1747 |
Symbol | sms2 |
ID | 6364515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 2085677 |
End bp | 2087215 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642680948 |
Product | DNA repair protein RadA |
Protein accession | YP_001955690 |
Protein GI | 189440609 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAT CAAGTGTGCA GTATGTATGT TCCGAATGCG GTTGGAACGG GCCGAAGTGG TACGGCCGTT GCCCCGAGTG TGGTCAGTGG GGCACGGTCG AGGAATTTCA CGAGGCTCGG CCGGCGGCAG GCTCTCGCAC GGCCGCTCCC GGCCGAACAT CACGCACGCA GTCGGTTACG GTTGCCAACA ACGCCAGATC TGCAGCCCGT CCGATTACCG AAGTGGGCAC GGAAAGCGTC GAGCGGCTCG GTACCGGGTT TTCCGAATTC GACCGTGTGC TCGGCGGTGG CGTGGTGCCG GGTTCAGTAA CGCTGATAGC GGGCGAACCG GGTATCGGCA AGTCGACATT GCTGTTGCAG ACGGCCGGCA ATATCGCGCG CGTTGTGGCG GGAGACAGTA CGTTCCGAGG GGCAGGTCAG CGGCCTGCCC AACAGTCGGG CCGGGCGCAG GGCAACGCAT CGAACACGGT GCCGATGCGG GGCAACGCAT CATCAACACA CGCCAACACC GTGCTGTACA TTTCCGGCGA GGAATCACAG GCGCAGGTTC GTTTGCGCGC TTCCCGCATC AATGCGGTGG AGCCGAACTT GTTACTGGCC TCCACCACCG ACCTGTCCAC AGTATTGGGG CTGATCGAAC AGAACAAGCC GGCCTTGGCC ATTGTGGATT CGGCGCAGAC CATCGTCTCG CAGGAGGTCG ATGGCATTTC CGGCGGTTCG ACTCAGGTGC GCGAAGTGGC AAGCGCGCTG ATAGATACCG CTAAGACACT TGACATTCCA GTATTTCTGG TTGGTCATGT GACCAAGGAT GGTTCGATTG CAGGCCCGCG CACATTGGAG CATCTGGTCG ATGTGGTCTG CCAATTCGAA GGCGACAGCG AGACTGCGCT GAGAATGCTG CGAGCGGTGA AGAATCGTTT TGGCCCGACC GATGAAGTCG GCTGTTTCGA CATGAGCGGT GAAGGCATCG AAGAGGTCAC CGATCCCGCC GGATTGTTCC TGTCTGGAGA CGGCCCTGAT GCGGCCAACG CGGCACCCGT GGAAGGCACC TGCGTGACGT TCACATTGGA TGGGCATCGC AGTCTGCCTA TCGAAGTACA GGCTCTGGTC ACCACGTCGG TGCTGCCCAC ACCCCGTCGT GCGGTCAATG GCGTGGACCC CAGCCGTATC GCCATGCTGG TCGCGGTGCT CTACCGTCAC AGCAAGCTCA ACCTGCTGTC CAACGACCTG TATATCTCCA CTATTGCCGG GGGCCAGGCC AAGGAGCCCG GTTCCGACTT GGCGATAGTG GCGGCACTGG CGAGCGCCGC CACGTCAAAA CCCATTGCGC GAGCCACGTG CGCCATTGGT GAGATTTCCC TGACCGGTCA GGTGCGCCCG GTACCGCGTA TGGAATATCG CCTTCGCGAG GCCGCACGCC TCGGCTTCAC CACGGCGGTC ATTCCGCCAC TGCGCAAGCC GGTGCATGTC GAGGGACTTC AGCTGGTGGA GTCCAACACA TTGTCCGACG CATTAGACGC CTTGGGAGTG CGTAAATAG
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Protein sequence | MAKSSVQYVC SECGWNGPKW YGRCPECGQW GTVEEFHEAR PAAGSRTAAP GRTSRTQSVT VANNARSAAR PITEVGTESV ERLGTGFSEF DRVLGGGVVP GSVTLIAGEP GIGKSTLLLQ TAGNIARVVA GDSTFRGAGQ RPAQQSGRAQ GNASNTVPMR GNASSTHANT VLYISGEESQ AQVRLRASRI NAVEPNLLLA STTDLSTVLG LIEQNKPALA IVDSAQTIVS QEVDGISGGS TQVREVASAL IDTAKTLDIP VFLVGHVTKD GSIAGPRTLE HLVDVVCQFE GDSETALRML RAVKNRFGPT DEVGCFDMSG EGIEEVTDPA GLFLSGDGPD AANAAPVEGT CVTFTLDGHR SLPIEVQALV TTSVLPTPRR AVNGVDPSRI AMLVAVLYRH SKLNLLSNDL YISTIAGGQA KEPGSDLAIV AALASAATSK PIARATCAIG EISLTGQVRP VPRMEYRLRE AARLGFTTAV IPPLRKPVHV EGLQLVESNT LSDALDALGV RK
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