| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1733 |
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| Symbol | rpoA |
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| ID | 6363817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2067354 |
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| End bp | 2068349 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642680933 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001955676 |
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| Protein GI | 189440595 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTATTG CACAGCGTCC GACTCTTACC GAGGAATCTC TGAATCCGCA GCGCTCCCGC
TTCACCATCG AGCCGCTCGA GCCTGGCTTC GGCTACACGC TCGGCAACTC GCTGCGTCGC
ACGCTGCTGA GCTCCATCCC GGGTGCTGCC GTGACCTCCG TGCGTATTTC CGGTGCCCTG
CATGAGTTCA CCACTCTGCC AGGTGTCCAG GAAGACGTCA CCGAGATCCT GCTGAACATC
AAGGGCATCG TGCTCACCAG CGAATACGAC GAGCCTGTGG TCATGTATCT GCGCAAGAGC
GGCAAGGGCG AAGCCGTGGC TGGGGACATC ACCCCGCCGG CCGGCGTCAC CATTGCCAAC
CCGGAGCAGC ACATCGCTAC CCTCGCCGAC GATGGCGAAC TCGAGATCGA GTTCACTGTC
GAGCGTGGCC GTGGCTATGT TCCTGCCCAG ATGAACAAGC AGGACAACGA TGAGATCGGC
CGTATTCCGG TTGATTCCAT CTACTCCCCG GTACTCAAGG TGAGCTACAA GGTCGAGGCC
ACCCGTGTGG AACAGCGCAC GGACTTCGAC AAGCTCATCC TGGACGTGGA GACCAAGCCC
GCCATCTCCC CGCGTGACGC GGTGGCTTCC GCCGGTTCCA CCTTGGTGGA GCTCTTCGGC
CTGTGCCGTG AGCTCAACGC CCAGGCTGAA GGCGTCGAGG TCGGTCCGGC CCCGGTGGCC
GAGGAGACCA ACCCCGAGAT GGCCGTTCCG ATTGAGGACC TCAACCTGAC GCAGCGTTCT
TACAACTGCC TCAAGCGCGA GGGCATCCAC ACCATCGGTG AGCTTGTCTC CCACACCGAG
CAGGACCTGC TCGACATCCG CAATTTCGGT ATGAAGTCAA TCGATGAGGT CAAGGAGAAG
CTGCAGACCT TGGGCCTGAG CCTCAAGTCC TCGCCGATGG CCTTCGATAC CAATAATCTC
GAAGGTGGCA CGTTCTTCTC GCCGGAAGAC GAGTGA
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| Protein sequence | MLIAQRPTLT EESLNPQRSR FTIEPLEPGF GYTLGNSLRR TLLSSIPGAA VTSVRISGAL
HEFTTLPGVQ EDVTEILLNI KGIVLTSEYD EPVVMYLRKS GKGEAVAGDI TPPAGVTIAN
PEQHIATLAD DGELEIEFTV ERGRGYVPAQ MNKQDNDEIG RIPVDSIYSP VLKVSYKVEA
TRVEQRTDFD KLILDVETKP AISPRDAVAS AGSTLVELFG LCRELNAQAE GVEVGPAPVA
EETNPEMAVP IEDLNLTQRS YNCLKREGIH TIGELVSHTE QDLLDIRNFG MKSIDEVKEK
LQTLGLSLKS SPMAFDTNNL EGGTFFSPED E
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