| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1723 |
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| Symbol | rplR |
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| ID | 6363807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2061644 |
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| End bp | 2062015 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642680923 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001955666 |
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| Protein GI | 189440585 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00474742 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGTTG CTATTCTCGG AAAAGGCAAG AAGGTAGCTC TCAAGCGCCG TCACGCGCGT
ATCCGCAAGC GCATCTCCGG TACCCCCGAG CGTCCGCGCC TGGTGGTCAC CCGCTCCAAC
CGTCATATGG TTGCTCAGGT GGTCGACGAT ACCAAGGGCA TTACCCTGGT GTCCGCCTCC
ACTCTTCAGG CCGACTTCGC CGGCTTCGAA GGCACCAAGA CTGAGGCCGC CAAGAAGGTC
GGCGAGCTGA TCGCCGAGAA GGCCAAGGCT GCCGGCATCA CCGCAGTCGT GTTCGACCGC
GGTGGCAACA AGTACACCGG TCGCGTCGCA GCCGTTGCTG ATGGCGCCCG CGAGGGAGGT
CTTGCACTGT GA
|
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| Protein sequence | MSVAILGKGK KVALKRRHAR IRKRISGTPE RPRLVVTRSN RHMVAQVVDD TKGITLVSAS
TLQADFAGFE GTKTEAAKKV GELIAEKAKA AGITAVVFDR GGNKYTGRVA AVADGAREGG
LAL
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