Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1722 |
Symbol | rplF |
ID | 6364151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 2061103 |
End bp | 2061642 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642680922 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001955665 |
Protein GI | 189440584 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0239785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCGC ATATTGGTAA GCTCCCCATC GCCATCCCTG CTGGCGTTGA AGTCAAGATT GAAGGCCAGA ACTTCTCCGC CAAGGGCGCT AAGGGTTCTG ACTCCTACGT GGTTCCGGAA GGCATCACCG CTGCCGTTGA AGGCAACGAG ATTGTCCTGA CCGCCGCTGA TGACCTGCGT CCGACCCGTG CCAAGCACGG TCTGGCTCGT TCCATCATGG CCGGCATGGT CAAGGGTGTT CACGATGGCT ACTCCAAGAC TCTTGAGATC GTCGGCACCG GTTACCGCGC CGTCGCCAAG GGCCAGGGCA TCGAGTTCTT CCTCGGCTAC TCCCACACCA TCACCGTCAA CCCGCCCGAA GGCATCACCC TGAAGGTGAC CGACGCCAAC CACGTGGTTG TCGAAGGCAC CGACAAGCAG GTCGTGGGCC AGGTTGCCGC CAACATCCGC AAGCTGCGCG CTCCGGAACC CTACAAGGGC AAGGGCATCA AGTACTCCGA TGAACGCATC CTGCGCAAGG CTGGAAAGGC TGGTAAGTGA
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Protein sequence | MASHIGKLPI AIPAGVEVKI EGQNFSAKGA KGSDSYVVPE GITAAVEGNE IVLTAADDLR PTRAKHGLAR SIMAGMVKGV HDGYSKTLEI VGTGYRAVAK GQGIEFFLGY SHTITVNPPE GITLKVTDAN HVVVEGTDKQ VVGQVAANIR KLRAPEPYKG KGIKYSDERI LRKAGKAGK
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