Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1703 |
Symbol | |
ID | 6364321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 2048001 |
End bp | 2049134 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642680903 |
Product | NagC family Transcriptional regulator |
Protein accession | YP_001955646 |
Protein GI | 189440565 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCATCAA CTGCAGTGAA AGCGCACAAC CGCAGTGCCA TGACCCAGTA TCTGTATGGC CATAGCCATG TCACCAAGCA GGAACTGGAA CGCGAGCTCG GCCTCAGCCT GCCCACCATC ACCCAAAATC TGCGCGCCCT AGAAGATGAC GGACTCATCC GCAAAGGCGA ACTGCAGGAT TCCACCGGCG GGCGCAAGGC GCAAAATTAT GAGTTCAATC CCGATCATCG CACTGCCATC GGGGTAGTGA TGCGGTCCAA CGAACTGCGC CTGTGCGCGA TTAACCTGTA CGGCAACGTC ATCGAAAAAC GCAACGATGC CCTGCCTTAC CGCAACACCA ACGTTTACTA CCAGCGTATC GGCGGCATCA TCAACAACTT CGCCGCCGAC GTCGAAAAGA AGCACGGCAA GGTGCTCGGC GTCTCGTTCG CCATCCAAGG CATCCTCTCC CCCGACGCCA CCACCATCAC CTTCGGCACC ATTATGGGCA ACACTGGGCT CACGCTCGAA ACCATCAGCC AATCGGTCCA TTACCCGTGC ATGATGATCC ACGATTCCGA TGCCTCAGCC ATGGCCGAAC TCTGGTTCGA CTCCACGCTC ACCGATGCGG TGTGCGTCTA TCTGGAGCGA CGCCCGGGCG GCGCGGTGAT CGCGGGGGGC AAGCTGTATC AAGGCCCGAA CCAGTGCAAC GGCGCCATCG AACACATGAC GCTGGTGCCG GGCGGCCGCG AATGCTACTG CGGCCAGCGC GGTTGCATGG ACACCTACTG CTCGCCGGAG ACCTTGCCCG AGGATTACGA AAGCATTCCC GGCTTCTTCA GCGTGCTTGA GCAGGGCGAA CGGCATCATC GCGAGCGCAT GGATGAGTGG CTGGATTACG TGGCGCAGGC CATCGTCAAC GCGCGATCCA TCATCGCGGG CGACGTGATT GTCGGCGGTG AAGCAGCCCA GCATCTTGAA GACAGCGACA TCGAGGATCT GAAGGCGCGC GTCATCGCAC GCAGCCCGTT CGGCACCGAC CATTTCAATC TGCGCAAGAG CTACTGCGCC GAAGACCAGA ACATCATCGG TGCCGCATTG CGATTCGCCG AGAATTATCT CGACGATATC TGTGGTGCTG CGGTACGCGG CTGA
|
Protein sequence | MPSTAVKAHN RSAMTQYLYG HSHVTKQELE RELGLSLPTI TQNLRALEDD GLIRKGELQD STGGRKAQNY EFNPDHRTAI GVVMRSNELR LCAINLYGNV IEKRNDALPY RNTNVYYQRI GGIINNFAAD VEKKHGKVLG VSFAIQGILS PDATTITFGT IMGNTGLTLE TISQSVHYPC MMIHDSDASA MAELWFDSTL TDAVCVYLER RPGGAVIAGG KLYQGPNQCN GAIEHMTLVP GGRECYCGQR GCMDTYCSPE TLPEDYESIP GFFSVLEQGE RHHRERMDEW LDYVAQAIVN ARSIIAGDVI VGGEAAQHLE DSDIEDLKAR VIARSPFGTD HFNLRKSYCA EDQNIIGAAL RFAENYLDDI CGAAVRG
|
| |