| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1667 |
|---|
| Symbol | rplJ |
|---|
| ID | 6364494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 2008980 |
|---|
| End bp | 2009501 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642680863 |
|---|
| Product | 50S ribosomal protein L10 |
|---|
| Protein accession | YP_001955610 |
|---|
| Protein GI | 189440529 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGGC CCGAAAAGGA AGCGGTAGTC GCTCAGCTTA CGGAAGAATT CCGTAACGCT
GACGCCGTCT ACCTGACCGA GTACCGCGGG CTTACCGTTC CGCAGATTTC CGATCTGCGT
GAAAAGCTAG GCCGCGATAC TTCCTACACC GTGGCAAAGA ACACGCTGGC ACGCATCGCC
GCCAAGGAAG CGGGCATTGA GGGTCTCGAC GAGATTCTCT CCGGCCCGAC CGCCATCACC
TTCGTGAAGG GCGACTTCAT CGAGGCTGCG AAGGTCATCC GTGACTTCGC CAAGGACAAC
AAGGCTCTTG TCATCAAGGG TGCCGCCGCT GACGGCACTG TCTACGATGC CGAGGGCGCC
AAGAAGCTGG CAGACCTCAA GTCCCGCCCG CAGCTGCTTG CCGAATTCGC CGGCGACATC
AAGGCATCGA TGGCCAAGGC CGCGTACCTG TTCAACGCTC TGCCTACCAA GGCTGTGCGC
ACGATCGACG CCCTGCGCGA AAAGCAGGAG AAGGCTGCCT GA
|
|---|
| Protein sequence | MKRPEKEAVV AQLTEEFRNA DAVYLTEYRG LTVPQISDLR EKLGRDTSYT VAKNTLARIA
AKEAGIEGLD EILSGPTAIT FVKGDFIEAA KVIRDFAKDN KALVIKGAAA DGTVYDAEGA
KKLADLKSRP QLLAEFAGDI KASMAKAAYL FNALPTKAVR TIDALREKQE KAA
|
|---|
| |