| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1624 |
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| Symbol | rplA |
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| ID | 6363988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1940568 |
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| End bp | 1941260 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642680816 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001955567 |
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| Protein GI | 189440486 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAAAGC GTTCCAAGAA GTACCGCGAA GCCGCTGAGC GCGTCGATCG CAACAACCTC
TACACCGCCA ACGAGGCCAT CGCTCTGCTC AAGAGCATGC CCTCCTACAA CTTCGACCAG
ACCGTCGAGG CTGTGTTCCG TCTGAGCGTT GACCCGCGTA AGGCCGACCA GCTCGTGCGT
GGTACCGTCA ACCTGCCTCA CGGCACTGGT AAGACCGCCA AGGTCCTCGT GTTCGCCCGT
GGCCCGAAGG CCACCGAGGC TACCGAGGCT GGCGCCGACA TCGTCGGTGA TGACGACCTG
ATCGCAAAGG TTCAGGGCGG CTTCCTCGAC TTCGACGCCG TGGTTGCTAC TCCGGACATG
ATGGGCAAGG TCGGCCGTCT GGGCCGTGTG CTCGGTCCGC GTGGCCTGAT GCCGAACCCC
AAGACCGGCA CCGTGACCAT GGATGTCACC AAGGCTGTCA AGGACATCAA GGGCGGCAAG
ATCGAGTTCC GTGTCGACAA GAACGGCAAC CTGAGCTTCC TCATCGGCAA GATGAGCTTC
GATGAGTCCG CTCTGGACGA GAACTTCAAG GCTGTGGCCG ACGAAGTCAA GCGTCTGAAG
CCGTCCACCG TGAAGGGCCG TTACCTGACC AAGGCAACCA TCACCTCCAC GATGAACCCG
GGCGTTCCGG TTGACCCGAA CACCCTGGCC TGA
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| Protein sequence | MVKRSKKYRE AAERVDRNNL YTANEAIALL KSMPSYNFDQ TVEAVFRLSV DPRKADQLVR
GTVNLPHGTG KTAKVLVFAR GPKATEATEA GADIVGDDDL IAKVQGGFLD FDAVVATPDM
MGKVGRLGRV LGPRGLMPNP KTGTVTMDVT KAVKDIKGGK IEFRVDKNGN LSFLIGKMSF
DESALDENFK AVADEVKRLK PSTVKGRYLT KATITSTMNP GVPVDPNTLA
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