| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1616 |
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| Symbol | rplU |
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| ID | 6364085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1933695 |
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| End bp | 1934003 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642680807 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_001955559 |
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| Protein GI | 189440478 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000151262 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACGCGA TTGTGAAGGC CGGTGGCCAT CAGGAAAAGG TCGAGGTTGG CGACGTCATC
CTCGTGAACC GTCTCGACGC TAAGAAGGGC GATACCGTGG AATTCCCGGT CTCCCTCGTT
GTCGATGGTG ACAAGGTCAC CCTTGCCGCC GCCGATCTGG CCAAGGTGTC CGTCAAGGCT
GAGGTTGTGA ACGACGAAGC CAAGGGCCCG AAGATTAGCA TCCAGAAGTA CAAGAACAAG
ACTGGTGTTG CTCGCCGTAA GGGTCATCGC CAGAAGCTGA CTATCGTCAA GATCACGGCG
ATTGCCTGA
|
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| Protein sequence | MYAIVKAGGH QEKVEVGDVI LVNRLDAKKG DTVEFPVSLV VDGDKVTLAA ADLAKVSVKA
EVVNDEAKGP KISIQKYKNK TGVARRKGHR QKLTIVKITA IA
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