| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1606 |
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| Symbol | lysA |
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| ID | 6364075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1917701 |
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| End bp | 1919293 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642680797 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001955549 |
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| Protein GI | 189440468 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.864311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTATTT CTCCAATTTG GCCGGCCGCT ACGGCTGTGA ATGCCGAAGG CTCCATCGAA
TTTCATGGTC GTACCGCCGA ATCGCTGCTC GACGAGTTCG GCTCGCCGCT CTATCTCATC
GACACTGATG AAGTAGTCGC ACGTGCCAGG CACTTCGTGC GCGCTGCCGC CGAAGCATTC
AACACATCCA CTACGCACGT GAGCTTTGCC GGTAAGGCGT TCCTGTCCAA AGAAGTCGTG
CGATTGGTCA CCGAGGCCGG CATGTTTGTG GACACCTGCA CGATGGGCGA GATGAAAATC
GCCCTCGCCG CTGGCGTTCC CGGACGTCGT CTGGTACTGC ACGGCAACAA CAAGTCCGAT
GAGGAAATCG CGCTGGCCAT CGAACAGGGC TTCGCCAAAA TCGTGATCGA CGAGCCCGAC
GAGCCGGAGC GCGTTGCTGC CATCGCCCGC AGGCTCGGCA AACGCGCCCG TGTGATGCTG
CGCGTCACCG TCGGTGTCCA CGCCGGCGGC CACGAGTACA TCTCCACTGC TCACGAGGAC
CAGAAGTTCG GCGTGCCGCT GCTGGCCGCC GGGGCCGACG CCGCCGTGCT CGATGTGCTG
AACGCCCTCA AAGACGTGAC TCCTGCCGCT ACCAACGCGC GTATCTCTGC GACGCATTCC
CCGGAAAATG GCGCGGAAAA GACCGAGAAA TCAGAGCGCG AGCTGCACTA CGACGTCAAG
TACCCGTACG ACCTGAGCCA CGAGGAAGTC TCCGACACAG ACAAGGCGCT GGCCGCCGCG
ATGGAAGCCA TTGCGGACGG TCCGTCCATC GCCGTGCTCA AGACCATCCT CGCCAACCAG
GACGTACTCG AACTGGTCGG AGCCCACTCG CACATCGGCT CCAACATCCA CGATGCGGAC
GCCTTCATTC ACGCGGCCAA GCGCATGATG CTGCTGCGCA AGACCCTGTG GGCCACCGAC
GCCTACATCC TGCCCGAAAT CGACCTCGGC GGCGGCTACT CCGTGGCCTA CACCGATGGC
GAAGATTCAA TGGACATCGA CGTGGAACTC ACTCGCTTGG CGGATGCGGT CAACAGCACC
AACCGTGCGC TCGGCATGCC CGCGCCAGCC ATCAGCTTCG AGCCGGGCCG TTACATCGTG
GCACCCGCCG GCGTAACCCT GTACCGCGTG GGCGCCATCA AGCACGTGCA CTTGTCCGAT
GCCAAAGACA GTGCCGGCAA CCCGATTGCC GAGCGCGTGT ATGTGTCCGT GGATGGCGGC
ATGTCCGACA ACATTCGCCC GGCACTCTAC GGTGCCGACT ACACCGCGCG TCTGGCGAAT
CGCACTGGTT CCGCTGAAAC GATGCTCGCC CGCGTGTGCG GTATGCACTG CGAATCCGGC
GACATTGTGG TTCACGAGGT GCAGTTGCCC GCCGATTTGA AGCGCGGTGA CATTCTCGCC
GTGCCGGTTA CCGGCGCATA CGGCCGCACC ATGGCCAGCA ACTACAACCA GGCGCTGATT
CCGGCGGTGG TTGCTGTCAG CGAGTCCGGC GCGCACGTCA TGCTCCGCCG CCAGACCGTA
GACGACCTAC TCAACCTCGA CGTCAGCGAG TAA
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| Protein sequence | MPISPIWPAA TAVNAEGSIE FHGRTAESLL DEFGSPLYLI DTDEVVARAR HFVRAAAEAF
NTSTTHVSFA GKAFLSKEVV RLVTEAGMFV DTCTMGEMKI ALAAGVPGRR LVLHGNNKSD
EEIALAIEQG FAKIVIDEPD EPERVAAIAR RLGKRARVML RVTVGVHAGG HEYISTAHED
QKFGVPLLAA GADAAVLDVL NALKDVTPAA TNARISATHS PENGAEKTEK SERELHYDVK
YPYDLSHEEV SDTDKALAAA MEAIADGPSI AVLKTILANQ DVLELVGAHS HIGSNIHDAD
AFIHAAKRMM LLRKTLWATD AYILPEIDLG GGYSVAYTDG EDSMDIDVEL TRLADAVNST
NRALGMPAPA ISFEPGRYIV APAGVTLYRV GAIKHVHLSD AKDSAGNPIA ERVYVSVDGG
MSDNIRPALY GADYTARLAN RTGSAETMLA RVCGMHCESG DIVVHEVQLP ADLKRGDILA
VPVTGAYGRT MASNYNQALI PAVVAVSESG AHVMLRRQTV DDLLNLDVSE
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